Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 CICP17-201ENST00000418553 2377 ntBASIC12.91□□□□□ -0.34
CENPAP49450 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.9□□□□□ -0.34
CENPAP49450 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CENPAP49450 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CENPAP49450 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CENPAP49450 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.9□□□□□ -0.34
CENPAP49450 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.9□□□□□ -0.34
CENPAP49450 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.9□□□□□ -0.34
CENPAP49450 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.9□□□□□ -0.34
CENPAP49450 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CENPAP49450 CNN2P8-201ENST00000421872 913 ntBASIC12.9□□□□□ -0.34
CENPAP49450 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.9□□□□□ -0.34
CENPAP49450 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.9□□□□□ -0.34
CENPAP49450 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.9□□□□□ -0.34
CENPAP49450 AK2P2-201ENST00000439142 405 ntBASIC12.9□□□□□ -0.34
CENPAP49450 AL355994.2-201ENST00000447882 704 ntBASIC12.9□□□□□ -0.34
CENPAP49450 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.9□□□□□ -0.34
CENPAP49450 HOMER2P2-201ENST00000451621 847 ntBASIC12.9□□□□□ -0.34
CENPAP49450 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.9□□□□□ -0.34
CENPAP49450 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CENPAP49450 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.9□□□□□ -0.34
CENPAP49450 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 AP006547.1-201ENST00000563435 692 ntBASIC12.9□□□□□ -0.34
CENPAP49450 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.9□□□□□ -0.34
CENPAP49450 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CENPAP49450 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.9□□□□□ -0.34
CENPAP49450 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.9□□□□□ -0.34
CENPAP49450 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.9□□□□□ -0.34
CENPAP49450 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CENPAP49450 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CENPAP49450 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CENPAP49450 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CENPAP49450 SHC1P1-201ENST00000425230 1745 ntBASIC12.9□□□□□ -0.34
CENPAP49450 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 FAM95B1-212ENST00000592873 4692 ntBASIC12.9□□□□□ -0.34
CENPAP49450 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CENPAP49450 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CENPAP49450 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CENPAP49450 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 MIR326-201ENST00000362220 95 ntBASIC12.89□□□□□ -0.35
CENPAP49450 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 AC010141.1-201ENST00000411585 623 ntBASIC12.89□□□□□ -0.35
CENPAP49450 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms