Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2B1P20020 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2B1P20020 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATP2B1P20020 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 AC007952.5-201ENST00000572818 1486 ntBASIC16.3■□□□□ 0.2
ATP2B1P20020 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATP2B1P20020 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 HMGA1P1-201ENST00000415560 1062 ntBASIC16.3■□□□□ 0.2
ATP2B1P20020 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP2B1P20020 EIF4HP1-201ENST00000453115 687 ntBASIC16.3■□□□□ 0.2
ATP2B1P20020 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP2B1P20020 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP2B1P20020 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP2B1P20020 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATP2B1P20020 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 MIR4525-201ENST00000580000 75 ntBASIC16.3■□□□□ 0.2
ATP2B1P20020 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 AL132994.2-201ENST00000603120 687 ntBASIC16.3■□□□□ 0.2
ATP2B1P20020 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP2B1P20020 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP2B1P20020 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP2B1P20020 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ATP2B1P20020 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP2B1P20020 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP2B1P20020 AC004898.1-201ENST00000451057 766 ntBASIC16.29■□□□□ 0.2
ATP2B1P20020 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP2B1P20020 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP2B1P20020 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP2B1P20020 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.29■□□□□ 0.2
ATP2B1P20020 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP2B1P20020 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATP2B1P20020 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 AC105206.1-202ENST00000314927 2368 ntBASIC16.29■□□□□ 0.2
ATP2B1P20020 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP2B1P20020 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP2B1P20020 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms