Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NFKB1P19838 AL391647.1-201ENST00000395664 511 ntBASIC14.33□□□□□ -0.12
NFKB1P19838 ACTG1P2-201ENST00000415776 1125 ntBASIC14.33□□□□□ -0.12
NFKB1P19838 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.33□□□□□ -0.12
NFKB1P19838 ACTG1P11-201ENST00000425411 1125 ntBASIC14.33□□□□□ -0.12
NFKB1P19838 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.33□□□□□ -0.12
NFKB1P19838 AL596276.2-201ENST00000447525 331 ntBASIC14.33□□□□□ -0.12
NFKB1P19838 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.33□□□□□ -0.12
NFKB1P19838 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.33□□□□□ -0.12
NFKB1P19838 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
NFKB1P19838 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NFKB1P19838 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NFKB1P19838 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.33□□□□□ -0.12
NFKB1P19838 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.33□□□□□ -0.12
NFKB1P19838 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.33□□□□□ -0.12
NFKB1P19838 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NFKB1P19838 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.33□□□□□ -0.12
NFKB1P19838 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 ABCD1P2-201ENST00000429313 1601 ntBASIC14.33□□□□□ -0.12
NFKB1P19838 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 MIR497HG-202ENST00000572453 3838 ntBASIC14.33□□□□□ -0.12
NFKB1P19838 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.33□□□□□ -0.12
NFKB1P19838 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.32□□□□□ -0.12
NFKB1P19838 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.32□□□□□ -0.12
NFKB1P19838 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.32□□□□□ -0.12
NFKB1P19838 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.32□□□□□ -0.12
NFKB1P19838 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 KRT17P5-201ENST00000332088 839 ntBASIC14.32□□□□□ -0.12
NFKB1P19838 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 MIR1247-201ENST00000408206 136 ntBASIC14.32□□□□□ -0.12
NFKB1P19838 AC006987.1-201ENST00000413610 527 ntBASIC14.32□□□□□ -0.12
NFKB1P19838 CYP46A4P-201ENST00000414953 267 ntBASIC14.32□□□□□ -0.12
NFKB1P19838 ISCA2P1-201ENST00000425548 448 ntBASIC14.32□□□□□ -0.12
NFKB1P19838 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
NFKB1P19838 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.32□□□□□ -0.12
NFKB1P19838 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.32□□□□□ -0.12
NFKB1P19838 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.32□□□□□ -0.12
NFKB1P19838 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NFKB1P19838 AC091544.8-201ENST00000619490 361 ntBASIC14.32□□□□□ -0.12
NFKB1P19838 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.32□□□□□ -0.12
NFKB1P19838 AC100757.4-201ENST00000626934 759 ntBASIC14.32□□□□□ -0.12
NFKB1P19838 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NFKB1P19838 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NFKB1P19838 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.32□□□□□ -0.12
NFKB1P19838 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 AC093462.1-201ENST00000621167 1683 ntBASIC14.32□□□□□ -0.12
NFKB1P19838 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.32□□□□□ -0.12
NFKB1P19838 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.32□□□□□ -0.12
NFKB1P19838 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.32□□□□□ -0.12
NFKB1P19838 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NFKB1P19838 AC025183.3-201ENST00000623526 1482 ntBASIC14.31□□□□□ -0.12
NFKB1P19838 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.31□□□□□ -0.12
NFKB1P19838 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 DMBT1P1-203ENST00000636837 4628 ntBASIC14.31□□□□□ -0.12
NFKB1P19838 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.31□□□□□ -0.12
NFKB1P19838 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NFKB1P19838 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NFKB1P19838 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NFKB1P19838 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms