Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.8□□□□□ -0.04
APOEP02649 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
APOEP02649 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
APOEP02649 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.8□□□□□ -0.04
APOEP02649 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.8□□□□□ -0.04
APOEP02649 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
APOEP02649 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 KRT17P5-201ENST00000332088 839 ntBASIC14.8□□□□□ -0.04
APOEP02649 AC103592.1-201ENST00000394513 664 ntBASIC14.8□□□□□ -0.04
APOEP02649 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 BANF1P3-201ENST00000412556 261 ntBASIC14.8□□□□□ -0.04
APOEP02649 HMGA1P1-201ENST00000415560 1062 ntBASIC14.8□□□□□ -0.04
APOEP02649 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.8□□□□□ -0.04
APOEP02649 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.8□□□□□ -0.04
APOEP02649 AC242376.1-201ENST00000559033 726 ntBASIC14.8□□□□□ -0.04
APOEP02649 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.8□□□□□ -0.04
APOEP02649 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.8□□□□□ -0.04
APOEP02649 PHBP15-201ENST00000574228 665 ntBASIC14.8□□□□□ -0.04
APOEP02649 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.8□□□□□ -0.04
APOEP02649 AC012044.1-201ENST00000603431 297 ntBASIC14.8□□□□□ -0.04
APOEP02649 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.8□□□□□ -0.04
APOEP02649 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.8□□□□□ -0.04
APOEP02649 FAM90A2P-201ENST00000511144 1395 ntBASIC14.8□□□□□ -0.04
APOEP02649 FAM90A25P-201ENST00000528404 1395 ntBASIC14.8□□□□□ -0.04
APOEP02649 LINC01815-202ENST00000641468 1409 ntBASIC14.8□□□□□ -0.04
APOEP02649 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
APOEP02649 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.8□□□□□ -0.04
APOEP02649 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.8□□□□□ -0.04
APOEP02649 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.8□□□□□ -0.04
APOEP02649 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 AL157996.1-201ENST00000624684 2299 ntBASIC14.8□□□□□ -0.04
APOEP02649 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOEP02649 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.79□□□□□ -0.04
APOEP02649 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.79□□□□□ -0.04
APOEP02649 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
APOEP02649 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.79□□□□□ -0.04
APOEP02649 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.79□□□□□ -0.04
APOEP02649 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
APOEP02649 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
APOEP02649 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.79□□□□□ -0.04
APOEP02649 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.79□□□□□ -0.04
APOEP02649 RPSAP15-201ENST00000448168 861 ntBASIC14.79□□□□□ -0.04
APOEP02649 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.79□□□□□ -0.04
APOEP02649 UPF3AP2-201ENST00000457924 1132 ntBASIC14.79□□□□□ -0.04
APOEP02649 KRT18P15-201ENST00000458108 1291 ntBASIC14.79□□□□□ -0.04
APOEP02649 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.79□□□□□ -0.04
APOEP02649 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.79□□□□□ -0.04
APOEP02649 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.79□□□□□ -0.04
APOEP02649 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.79□□□□□ -0.04
APOEP02649 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOEP02649 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.79□□□□□ -0.04
APOEP02649 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
APOEP02649 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOEP02649 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 AC107918.4-201ENST00000641966 3141 ntBASIC14.79□□□□□ -0.04
APOEP02649 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOEP02649 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms