Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 GPR53P-205ENST00000457298 1084 ntBASIC13.72□□□□□ -0.21
KRT6AP02538 RPL18P13-201ENST00000478088 569 ntBASIC13.72□□□□□ -0.21
KRT6AP02538 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.72□□□□□ -0.21
KRT6AP02538 GOLGA2P8-201ENST00000505201 779 ntBASIC13.72□□□□□ -0.21
KRT6AP02538 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
KRT6AP02538 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.72□□□□□ -0.21
KRT6AP02538 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 AC005324.6-201ENST00000587972 613 ntBASIC13.72□□□□□ -0.21
KRT6AP02538 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.72□□□□□ -0.21
KRT6AP02538 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 AL365181.3-201ENST00000605886 3222 ntBASIC13.72□□□□□ -0.21
KRT6AP02538 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 AC020658.7-201ENST00000624274 2442 ntBASIC13.72□□□□□ -0.21
KRT6AP02538 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 ABCD1P2-201ENST00000429313 1601 ntBASIC13.72□□□□□ -0.21
KRT6AP02538 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
KRT6AP02538 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
KRT6AP02538 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
KRT6AP02538 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.71□□□□□ -0.21
KRT6AP02538 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
KRT6AP02538 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.71□□□□□ -0.21
KRT6AP02538 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.71□□□□□ -0.21
KRT6AP02538 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
KRT6AP02538 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.71□□□□□ -0.21
KRT6AP02538 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.71□□□□□ -0.21
KRT6AP02538 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.71□□□□□ -0.21
KRT6AP02538 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.71□□□□□ -0.21
KRT6AP02538 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.71□□□□□ -0.21
KRT6AP02538 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.71□□□□□ -0.21
KRT6AP02538 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.71□□□□□ -0.21
KRT6AP02538 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
KRT6AP02538 AC092299.1-201ENST00000632679 757 ntBASIC13.71□□□□□ -0.21
KRT6AP02538 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 RPL13AP3-202ENST00000494676 1473 ntBASIC13.71□□□□□ -0.21
KRT6AP02538 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRT6AP02538 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.71□□□□□ -0.22
KRT6AP02538 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.71□□□□□ -0.22
KRT6AP02538 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
KRT6AP02538 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRT6AP02538 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms