Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.9□□□□□ -0.18
PDGFBP01127 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC13.9□□□□□ -0.18
PDGFBP01127 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.9□□□□□ -0.18
PDGFBP01127 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 MIR600HG-201ENST00000449175 5984 ntBASIC13.9□□□□□ -0.18
PDGFBP01127 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PDGFBP01127 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.9□□□□□ -0.18
PDGFBP01127 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.9□□□□□ -0.18
PDGFBP01127 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
PDGFBP01127 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PDGFBP01127 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
PDGFBP01127 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.89□□□□□ -0.19
PDGFBP01127 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
PDGFBP01127 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.89□□□□□ -0.19
PDGFBP01127 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC13.89□□□□□ -0.19
PDGFBP01127 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PDGFBP01127 HMGA1P1-201ENST00000415560 1062 ntBASIC13.89□□□□□ -0.19
PDGFBP01127 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC13.89□□□□□ -0.19
PDGFBP01127 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
PDGFBP01127 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC13.89□□□□□ -0.19
PDGFBP01127 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC13.89□□□□□ -0.19
PDGFBP01127 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.89□□□□□ -0.19
PDGFBP01127 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC13.89□□□□□ -0.19
PDGFBP01127 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PDGFBP01127 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC13.89□□□□□ -0.19
PDGFBP01127 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC13.89□□□□□ -0.19
PDGFBP01127 MIR4326-201ENST00000582203 59 ntBASIC13.89□□□□□ -0.19
PDGFBP01127 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC13.89□□□□□ -0.19
PDGFBP01127 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.89□□□□□ -0.19
PDGFBP01127 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
PDGFBP01127 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDGFBP01127 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PDGFBP01127 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.89□□□□□ -0.19
PDGFBP01127 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PDGFBP01127 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC13.88□□□□□ -0.19
PDGFBP01127 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.88□□□□□ -0.19
PDGFBP01127 STK16-202ENST00000409260 1493 ntTSL 5 BASIC13.88□□□□□ -0.19
PDGFBP01127 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 AC067930.6-201ENST00000623257 4947 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PDGFBP01127 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 MIR193A-201ENST00000384882 88 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 SNORD88B-201ENST00000408454 91 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC13.88□□□□□ -0.19
PDGFBP01127 RFNG-202ENST00000429557 994 ntTSL 5 BASIC13.88□□□□□ -0.19
PDGFBP01127 HNRNPA1P59-201ENST00000430583 918 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 AC007881.1-201ENST00000437460 187 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 ACTG1P23-201ENST00000437653 1074 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.88□□□□□ -0.19
PDGFBP01127 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC13.88□□□□□ -0.19
PDGFBP01127 RPL29P2-202ENST00000498671 657 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 NDUFB2P1-201ENST00000506966 295 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 AC104117.4-201ENST00000521486 847 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 AC133555.4-201ENST00000569081 152 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC13.88□□□□□ -0.19
PDGFBP01127 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.88□□□□□ -0.19
PDGFBP01127 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC13.88□□□□□ -0.19
PDGFBP01127 AL078624.1-201ENST00000604004 547 ntBASIC13.88□□□□□ -0.19
PDGFBP01127 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.88□□□□□ -0.19
PDGFBP01127 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PDGFBP01127 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms