Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
GPC4O75487 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GPC4O75487 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.22□□□□□ -0.13
GPC4O75487 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.21□□□□□ -0.13
GPC4O75487 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GPC4O75487 TUBB8P4-201ENST00000511806 1324 ntBASIC14.21□□□□□ -0.13
GPC4O75487 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.21□□□□□ -0.13
GPC4O75487 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GPC4O75487 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
GPC4O75487 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.21□□□□□ -0.13
GPC4O75487 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.21□□□□□ -0.13
GPC4O75487 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.21□□□□□ -0.13
GPC4O75487 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.21□□□□□ -0.13
GPC4O75487 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.21□□□□□ -0.13
GPC4O75487 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
GPC4O75487 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.21□□□□□ -0.13
GPC4O75487 AC104306.2-201ENST00000451877 341 ntBASIC14.21□□□□□ -0.13
GPC4O75487 SERPINA13P-202ENST00000478994 924 ntBASIC14.21□□□□□ -0.13
GPC4O75487 AC108725.1-201ENST00000495472 409 ntBASIC14.21□□□□□ -0.13
GPC4O75487 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.21□□□□□ -0.13
GPC4O75487 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
GPC4O75487 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.21□□□□□ -0.13
GPC4O75487 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.21□□□□□ -0.13
GPC4O75487 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.21□□□□□ -0.13
GPC4O75487 AC124068.2-201ENST00000569473 1109 ntBASIC14.21□□□□□ -0.13
GPC4O75487 RN7SL163P-201ENST00000583100 276 ntBASIC14.21□□□□□ -0.13
GPC4O75487 AC008805.1-201ENST00000590892 364 ntBASIC14.21□□□□□ -0.13
GPC4O75487 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.21□□□□□ -0.13
GPC4O75487 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.21□□□□□ -0.13
GPC4O75487 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
GPC4O75487 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GPC4O75487 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GPC4O75487 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
GPC4O75487 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
GPC4O75487 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.21□□□□□ -0.14
GPC4O75487 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GPC4O75487 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.2□□□□□ -0.14
GPC4O75487 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GPC4O75487 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.2□□□□□ -0.14
GPC4O75487 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 AL365181.3-201ENST00000605886 3222 ntBASIC14.2□□□□□ -0.14
GPC4O75487 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.2□□□□□ -0.14
GPC4O75487 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.2□□□□□ -0.14
GPC4O75487 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GPC4O75487 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GPC4O75487 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 XBP1P1-201ENST00000436573 652 ntBASIC14.2□□□□□ -0.14
GPC4O75487 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.2□□□□□ -0.14
GPC4O75487 AC104073.2-201ENST00000453737 312 ntBASIC14.2□□□□□ -0.14
GPC4O75487 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.2□□□□□ -0.14
GPC4O75487 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GPC4O75487 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.2□□□□□ -0.14
GPC4O75487 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.2□□□□□ -0.14
GPC4O75487 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 SNORD3B-2-202ENST00000571722 791 ntBASIC14.2□□□□□ -0.14
GPC4O75487 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.2□□□□□ -0.14
GPC4O75487 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.2□□□□□ -0.14
GPC4O75487 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.2□□□□□ -0.14
GPC4O75487 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.2□□□□□ -0.14
GPC4O75487 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.2□□□□□ -0.14
GPC4O75487 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.2□□□□□ -0.14
GPC4O75487 AC072061.1-201ENST00000569710 2234 ntBASIC14.2□□□□□ -0.14
GPC4O75487 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.2□□□□□ -0.14
GPC4O75487 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.2□□□□□ -0.14
GPC4O75487 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
GPC4O75487 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GPC4O75487 AL022313.4-201ENST00000562756 2046 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms