Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 AC100827.2-201ENST00000563214 1194 ntBASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 AC106886.1-201ENST00000568660 600 ntBASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 AL928654.5-201ENST00000624831 2501 ntBASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
POLR2J2Q9GZM3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 AC144522.1-201ENST00000625111 1658 ntBASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 COX5BP8-201ENST00000416911 349 ntBASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 AC006122.1-201ENST00000493323 440 ntBASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 PGAM1P5-201ENST00000548011 764 ntBASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 AP000346.4-201ENST00000614827 381 ntBASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 AL162426.1-201ENST00000624141 743 ntBASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 AGAP12P-201ENST00000585227 2359 ntBASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms