Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHAMP1Q96JM3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 AP002353.1-201ENST00000528257 1599 ntBASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 AC079776.1-201ENST00000401540 1152 ntBASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 AL355994.2-201ENST00000447882 704 ntBASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 AC090386.2-201ENST00000623010 1039 ntBASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHAMP1Q96JM3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 GOLGA2P5-201ENST00000266746 2395 ntBASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 HMGA1P1-201ENST00000415560 1062 ntBASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 AC006122.1-201ENST00000493323 440 ntBASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 AHCYP2-201ENST00000430630 1300 ntBASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 LINC01165-201ENST00000445190 1623 ntBASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 DLX4-206ENST00000611342 1662 ntBASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHAMP1Q96JM3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms