Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFT1Q96AA3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFT1Q96AA3 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFT1Q96AA3 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFT1Q96AA3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFT1Q96AA3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RFT1Q96AA3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.58□□□□□ -0.4
RFT1Q96AA3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RFT1Q96AA3 AL138709.1-201ENST00000614840 1693 ntBASIC12.57□□□□□ -0.4
RFT1Q96AA3 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 AL928654.5-201ENST00000624831 2501 ntBASIC12.57□□□□□ -0.4
RFT1Q96AA3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 AC115284.2-201ENST00000624646 2054 ntBASIC12.57□□□□□ -0.4
RFT1Q96AA3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 AL590640.2-201ENST00000457038 527 ntBASIC12.57□□□□□ -0.4
RFT1Q96AA3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 TP53TG3HP-202ENST00000569755 579 ntBASIC12.57□□□□□ -0.4
RFT1Q96AA3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.57□□□□□ -0.4
RFT1Q96AA3 RPSAP52-203ENST00000622976 1023 ntBASIC12.57□□□□□ -0.4
RFT1Q96AA3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 AC026271.4-201ENST00000578214 1833 ntBASIC12.57□□□□□ -0.4
RFT1Q96AA3 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFT1Q96AA3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RFT1Q96AA3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RFT1Q96AA3 RN7SKP175-201ENST00000408472 289 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 ACTG1P3-201ENST00000431775 1114 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 PUDPP3-201ENST00000445368 636 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RFT1Q96AA3 TERF1P3-201ENST00000505638 1227 ntBASIC12.56□□□□□ -0.4
RFT1Q96AA3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms