Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AL157792.1-201ENST00000488281 530 ntBASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AC026410.1-201ENST00000507366 1101 ntBASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AL512310.5-201ENST00000551999 515 ntBASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 LINC00244-201ENST00000625073 613 ntBASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AC130686.1-201ENST00000622936 2466 ntBASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 AC007952.5-201ENST00000572818 1486 ntBASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 KRT8P18-201ENST00000413425 1445 ntBASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.77□□□□□ -0.04
SHKBP1Q8TBC3 RNVU1-8-201ENST00000364272 125 ntBASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 LINC00265-2P-201ENST00000413372 782 ntBASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 RN7SL788P-201ENST00000460504 316 ntBASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 CHCHD2P2-201ENST00000503744 321 ntBASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 AL359183.1-201ENST00000623796 2132 ntBASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.77□□□□□ -0.05
SHKBP1Q8TBC3 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 RPL35P9-201ENST00000446059 350 ntBASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.76□□□□□ -0.05
SHKBP1Q8TBC3 AC226150.1-201ENST00000544259 466 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms