Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 AC012183.1-201ENST00000625197 499 ntBASIC13.21□□□□□ -0.29
NUP43Q8NFH3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.21□□□□□ -0.3
NUP43Q8NFH3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.21□□□□□ -0.3
NUP43Q8NFH3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NUP43Q8NFH3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
NUP43Q8NFH3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
NUP43Q8NFH3 SALL4P6-201ENST00000429385 1691 ntBASIC13.21□□□□□ -0.3
NUP43Q8NFH3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NUP43Q8NFH3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.21□□□□□ -0.3
NUP43Q8NFH3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NUP43Q8NFH3 LINC01165-201ENST00000445190 1623 ntBASIC13.21□□□□□ -0.3
NUP43Q8NFH3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 AC005014.1-201ENST00000432006 2976 ntBASIC13.2□□□□□ -0.3
NUP43Q8NFH3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 AC009474.1-201ENST00000455096 1565 ntBASIC13.2□□□□□ -0.3
NUP43Q8NFH3 AC008620.2-201ENST00000510294 1569 ntBASIC13.2□□□□□ -0.3
NUP43Q8NFH3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 AGAP12P-201ENST00000585227 2359 ntBASIC13.2□□□□□ -0.3
NUP43Q8NFH3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 ACTBP11-201ENST00000436287 1126 ntBASIC13.2□□□□□ -0.3
NUP43Q8NFH3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 AC026740.1-201ENST00000607068 791 ntBASIC13.2□□□□□ -0.3
NUP43Q8NFH3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 NAP1L6-202ENST00000641404 1222 ntBASIC13.2□□□□□ -0.3
NUP43Q8NFH3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 ABCD1P2-201ENST00000429313 1601 ntBASIC13.2□□□□□ -0.3
NUP43Q8NFH3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP43Q8NFH3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms