Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 AC010328.2-201ENST00000597698 1111 ntBASIC12.64□□□□□ -0.39
LRRC28Q86X40 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LRRC28Q86X40 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LRRC28Q86X40 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.63□□□□□ -0.39
LRRC28Q86X40 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 PCDHA6-201ENST00000378126 3267 ntBASIC12.63□□□□□ -0.39
LRRC28Q86X40 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.63□□□□□ -0.39
LRRC28Q86X40 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 FAM8A4P-201ENST00000435433 1213 ntBASIC12.63□□□□□ -0.39
LRRC28Q86X40 GCOM2-201ENST00000509133 1104 ntBASIC12.63□□□□□ -0.39
LRRC28Q86X40 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRRC28Q86X40 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LRRC28Q86X40 TUBB1P2-201ENST00000422712 1306 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 TUBB1P1-201ENST00000503144 1300 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 AL354989.2-201ENST00000435838 1540 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 AC026271.4-201ENST00000578214 1833 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 AC073869.1-201ENST00000415574 2762 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 AC060814.4-201ENST00000594169 2163 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 AC115284.2-201ENST00000624646 2054 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms