Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 AC118758.2-201ENST00000614242 2813 ntBASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 RPSAP15-201ENST00000448168 861 ntBASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 AL353637.1-201ENST00000451571 732 ntBASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 UPF3AP2-201ENST00000457924 1132 ntBASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 GOLGA2P8-201ENST00000505201 779 ntBASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 RTN3P1-201ENST00000536295 711 ntBASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 ADAM3B-201ENST00000569937 840 ntBASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 AC068760.1-201ENST00000493579 1953 ntBASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD3Q7Z3D4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AC083964.2-201ENST00000623988 2396 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AL591122.2-201ENST00000624125 1853 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AC015909.5-201ENST00000624336 2266 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 RN7SL720P-201ENST00000488178 304 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 CHCHD2P2-201ENST00000503744 321 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AC008723.1-201ENST00000506922 207 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 CHMP4BP1-201ENST00000556017 588 ntBASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.19□□□□□ -0.14
LYSMD3Q7Z3D4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms