Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PGAM1P10-201ENST00000402426 761 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 PAUPAR-201ENST00000630360 2965 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 MIR2277-201ENST00000515916 93 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AC005586.2-201ENST00000563946 837 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 IGHV1OR16-3-201ENST00000568138 205 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 RN7SL322P-201ENST00000583519 299 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 MIR7704-201ENST00000610524 59 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AC010776.3-201ENST00000617349 424 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 AL513477.1-201ENST00000602865 2407 ntBASIC13.39□□□□□ -0.27
RIF1Q5UIP0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 CA6-205ENST00000480186 1493 ntTSL 2 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AC253536.1-201ENST00000437021 315 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AC079250.1-201ENST00000456046 531 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AP001102.1-201ENST00000528959 409 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AC008741.2-201ENST00000612792 3115 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 OR7E122P-201ENST00000383606 1017 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 HLA-DQB3-203ENST00000425319 356 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 NDUFB2P1-201ENST00000506966 295 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AC116036.2-201ENST00000607592 462 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 AL137028.2-201ENST00000614601 256 ntBASIC13.38□□□□□ -0.27
RIF1Q5UIP0 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RIF1Q5UIP0 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms