Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABREP78334 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.38□□□□□ -0.27
GABREP78334 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.38□□□□□ -0.27
GABREP78334 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GABREP78334 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABREP78334 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GABREP78334 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GABREP78334 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GABREP78334 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GABREP78334 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABREP78334 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABREP78334 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GABREP78334 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GABREP78334 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.38□□□□□ -0.27
GABREP78334 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GABREP78334 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.38□□□□□ -0.27
GABREP78334 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.38□□□□□ -0.27
GABREP78334 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GABREP78334 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABREP78334 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.37□□□□□ -0.27
GABREP78334 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.37□□□□□ -0.27
GABREP78334 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
GABREP78334 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.37□□□□□ -0.27
GABREP78334 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.37□□□□□ -0.27
GABREP78334 AP000244.1-201ENST00000424582 201 ntBASIC13.37□□□□□ -0.27
GABREP78334 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.37□□□□□ -0.27
GABREP78334 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.37□□□□□ -0.27
GABREP78334 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.37□□□□□ -0.27
GABREP78334 AC093300.1-201ENST00000510368 1201 ntBASIC13.37□□□□□ -0.27
GABREP78334 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
GABREP78334 AC092862.1-201ENST00000541534 533 ntBASIC13.37□□□□□ -0.27
GABREP78334 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.37□□□□□ -0.27
GABREP78334 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC13.37□□□□□ -0.27
GABREP78334 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC13.37□□□□□ -0.27
GABREP78334 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GABREP78334 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.37□□□□□ -0.27
GABREP78334 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
GABREP78334 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 ENPP7P8-202ENST00000527856 1345 ntBASIC13.37□□□□□ -0.27
GABREP78334 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GABREP78334 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GABREP78334 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
GABREP78334 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GABREP78334 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.36□□□□□ -0.27
GABREP78334 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.36□□□□□ -0.27
GABREP78334 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GABREP78334 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GABREP78334 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.36□□□□□ -0.27
GABREP78334 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.36□□□□□ -0.27
GABREP78334 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GABREP78334 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GABREP78334 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC13.36□□□□□ -0.27
GABREP78334 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms