Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
CLDN17P56750 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 RCC2P1-201ENST00000452257 1476 ntBASIC12.62□□□□□ -0.39
CLDN17P56750 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.62□□□□□ -0.39
CLDN17P56750 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN17P56750 CYP46A4P-201ENST00000414953 267 ntBASIC12.62□□□□□ -0.39
CLDN17P56750 ISCA2P1-201ENST00000425548 448 ntBASIC12.62□□□□□ -0.39
CLDN17P56750 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 AL596276.2-201ENST00000447525 331 ntBASIC12.62□□□□□ -0.39
CLDN17P56750 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.62□□□□□ -0.39
CLDN17P56750 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN17P56750 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 CHCHD2P2-201ENST00000503744 321 ntBASIC12.62□□□□□ -0.39
CLDN17P56750 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN17P56750 ALG1L13P-202ENST00000519320 584 ntBASIC12.62□□□□□ -0.39
CLDN17P56750 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 AC089987.1-201ENST00000551654 2209 ntBASIC12.62□□□□□ -0.39
CLDN17P56750 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 AC107918.4-201ENST00000641966 3141 ntBASIC12.62□□□□□ -0.39
CLDN17P56750 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CLDN17P56750 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CLDN17P56750 AC068760.1-201ENST00000493579 1953 ntBASIC12.61□□□□□ -0.39
CLDN17P56750 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN17P56750 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 FP325330.2-201ENST00000624219 5630 ntBASIC12.61□□□□□ -0.39
CLDN17P56750 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CLDN17P56750 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN17P56750 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN17P56750 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CLDN17P56750 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN17P56750 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CLDN17P56750 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 FAM90A12P-201ENST00000519497 2375 ntBASIC12.61□□□□□ -0.39
CLDN17P56750 FAM90A24P-201ENST00000520792 2369 ntBASIC12.61□□□□□ -0.39
CLDN17P56750 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 OR8T1P-201ENST00000421347 918 ntBASIC12.61□□□□□ -0.39
CLDN17P56750 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN17P56750 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 Z97180.1-201ENST00000445173 988 ntBASIC12.61□□□□□ -0.39
CLDN17P56750 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN17P56750 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.61□□□□□ -0.39
CLDN17P56750 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN17P56750 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN17P56750 KRT8P1-201ENST00000557533 1207 ntBASIC12.61□□□□□ -0.39
CLDN17P56750 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms