Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 AL354702.1-201ENST00000442006 1960 ntBASIC13.49□□□□□ -0.25
CLDN6P56747 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 FKBP4P8-201ENST00000610931 1369 ntBASIC13.49□□□□□ -0.25
CLDN6P56747 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CLDN6P56747 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CLDN6P56747 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN6P56747 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CLDN6P56747 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN6P56747 AC104961.1-201ENST00000427605 771 ntBASIC13.49□□□□□ -0.25
CLDN6P56747 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC13.49□□□□□ -0.25
CLDN6P56747 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.49□□□□□ -0.25
CLDN6P56747 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN6P56747 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
CLDN6P56747 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 SLC25A15P3-201ENST00000505530 290 ntBASIC13.49□□□□□ -0.25
CLDN6P56747 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CLDN6P56747 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN6P56747 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN6P56747 RN7SL455P-201ENST00000580629 282 ntBASIC13.49□□□□□ -0.25
CLDN6P56747 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC13.49□□□□□ -0.25
CLDN6P56747 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN6P56747 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLDN6P56747 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 MYADML-201ENST00000474610 2147 ntBASIC13.49□□□□□ -0.25
CLDN6P56747 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CLDN6P56747 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN6P56747 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLDN6P56747 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN6P56747 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDN6P56747 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CLDN6P56747 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CLDN6P56747 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CLDN6P56747 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CLDN6P56747 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDN6P56747 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CLDN6P56747 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
CLDN6P56747 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 AC011498.7-201ENST00000624986 2027 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CLDN6P56747 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.48□□□□□ -0.25
CLDN6P56747 KRT18P4-201ENST00000422599 1288 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 ASS1P2-201ENST00000439895 1223 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.48□□□□□ -0.25
CLDN6P56747 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC13.48□□□□□ -0.25
CLDN6P56747 AC092896.1-201ENST00000465850 380 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 AC025186.1-201ENST00000478174 870 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 IGHEP1-201ENST00000521393 651 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 AC068831.5-201ENST00000557387 328 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 RN7SL556P-201ENST00000582856 298 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC13.48□□□□□ -0.25
CLDN6P56747 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.48□□□□□ -0.25
CLDN6P56747 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDN6P56747 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN6P56747 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CLDN6P56747 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms