Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 AL139158.3-201ENST00000641212 1562 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.16□□□□□ -0.3
EFNA3P52797 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 RPL3P2-204ENST00000413027 1203 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 AC018638.5-201ENST00000450885 754 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 AC104784.1-201ENST00000473096 294 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.16□□□□□ -0.3
EFNA3P52797 RNA5SP417-201ENST00000516459 108 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 AC138701.2-201ENST00000553634 226 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 AP003419.4-201ENST00000616071 517 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 AC091769.1-201ENST00000619576 568 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 COX6A1P2-201ENST00000620597 330 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 AC073911.3-201ENST00000624401 631 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 AC019109.1-201ENST00000401725 1874 ntBASIC13.16□□□□□ -0.3
EFNA3P52797 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
EFNA3P52797 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
EFNA3P52797 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNA3P52797 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNA3P52797 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNA3P52797 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNA3P52797 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 TEKT4P2-202ENST00000559466 1312 ntBASIC13.15□□□□□ -0.3
EFNA3P52797 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
EFNA3P52797 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.15□□□□□ -0.3
EFNA3P52797 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNA3P52797 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNA3P52797 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNA3P52797 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms