Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CDK7P50613 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 AC104961.1-201ENST00000427605 771 ntBASIC15.48■□□□□ 0.07
CDK7P50613 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.48■□□□□ 0.07
CDK7P50613 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 AC092612.1-201ENST00000514501 998 ntBASIC15.48■□□□□ 0.07
CDK7P50613 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.48■□□□□ 0.07
CDK7P50613 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.48■□□□□ 0.07
CDK7P50613 AL590235.1-201ENST00000564650 861 ntBASIC15.48■□□□□ 0.07
CDK7P50613 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 AC126755.5-201ENST00000622756 267 ntBASIC15.48■□□□□ 0.07
CDK7P50613 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CDK7P50613 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK7P50613 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDK7P50613 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK7P50613 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 AL359183.1-201ENST00000623796 2132 ntBASIC15.47■□□□□ 0.07
CDK7P50613 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK7P50613 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDK7P50613 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 ABCD1P4-201ENST00000399687 604 ntBASIC15.47■□□□□ 0.07
CDK7P50613 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC15.47■□□□□ 0.07
CDK7P50613 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.47■□□□□ 0.07
CDK7P50613 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK7P50613 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC15.47■□□□□ 0.07
CDK7P50613 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
CDK7P50613 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 FTLP5-201ENST00000586853 534 ntBASIC15.47■□□□□ 0.07
CDK7P50613 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.47■□□□□ 0.07
CDK7P50613 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC15.47■□□□□ 0.07
CDK7P50613 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC15.47■□□□□ 0.07
CDK7P50613 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CDK7P50613 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK7P50613 AL049840.2-201ENST00000602722 535 ntBASIC15.47■□□□□ 0.07
CDK7P50613 URAHP-205ENST00000610227 398 ntBASIC15.47■□□□□ 0.07
CDK7P50613 MIR6816-201ENST00000620368 66 ntBASIC15.47■□□□□ 0.07
CDK7P50613 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.47■□□□□ 0.07
CDK7P50613 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CDK7P50613 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK7P50613 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDK7P50613 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDK7P50613 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CDK7P50613 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.47■□□□□ 0.07
CDK7P50613 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDK7P50613 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.46■□□□□ 0.07
CDK7P50613 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.46■□□□□ 0.07
CDK7P50613 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.46■□□□□ 0.07
CDK7P50613 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CDK7P50613 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 AC106827.1-201ENST00000366454 431 ntBASIC15.46■□□□□ 0.07
CDK7P50613 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDK7P50613 ACTBP14-201ENST00000411655 1089 ntBASIC15.46■□□□□ 0.07
CDK7P50613 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms