Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
MTHFRP42898 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.72□□□□□ -0.05
MTHFRP42898 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.72□□□□□ -0.05
MTHFRP42898 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
MTHFRP42898 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.71□□□□□ -0.05
MTHFRP42898 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
MTHFRP42898 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.71□□□□□ -0.05
MTHFRP42898 ENPP7P8-202ENST00000527856 1345 ntBASIC14.71□□□□□ -0.05
MTHFRP42898 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MTHFRP42898 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MTHFRP42898 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 ABCD1P4-201ENST00000399687 604 ntBASIC14.71□□□□□ -0.05
MTHFRP42898 OR2W2P-201ENST00000406313 909 ntBASIC14.71□□□□□ -0.05
MTHFRP42898 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.71□□□□□ -0.05
MTHFRP42898 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.71□□□□□ -0.05
MTHFRP42898 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
MTHFRP42898 AC025186.1-201ENST00000478174 870 ntBASIC14.71□□□□□ -0.05
MTHFRP42898 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 AC093300.1-201ENST00000510368 1201 ntBASIC14.71□□□□□ -0.05
MTHFRP42898 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.05
MTHFRP42898 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.71□□□□□ -0.05
MTHFRP42898 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.71□□□□□ -0.05
MTHFRP42898 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.71□□□□□ -0.05
MTHFRP42898 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.71□□□□□ -0.05
MTHFRP42898 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.71□□□□□ -0.05
MTHFRP42898 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.71□□□□□ -0.05
MTHFRP42898 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MTHFRP42898 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
MTHFRP42898 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
MTHFRP42898 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.71□□□□□ -0.05
MTHFRP42898 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.71□□□□□ -0.06
MTHFRP42898 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.71□□□□□ -0.06
MTHFRP42898 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.71□□□□□ -0.06
MTHFRP42898 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.71□□□□□ -0.06
MTHFRP42898 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.71□□□□□ -0.06
MTHFRP42898 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.71□□□□□ -0.06
MTHFRP42898 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.71□□□□□ -0.06
MTHFRP42898 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MTHFRP42898 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
MTHFRP42898 ST20-AS1-201ENST00000560255 4223 ntBASIC14.71□□□□□ -0.06
MTHFRP42898 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 RPL13AP3-202ENST00000494676 1473 ntBASIC14.7□□□□□ -0.06
MTHFRP42898 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.7□□□□□ -0.06
MTHFRP42898 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
MTHFRP42898 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.7□□□□□ -0.06
MTHFRP42898 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
MTHFRP42898 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
MTHFRP42898 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.7□□□□□ -0.06
MTHFRP42898 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 FAM21EP-201ENST00000417804 985 ntBASIC14.7□□□□□ -0.06
MTHFRP42898 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.7□□□□□ -0.06
MTHFRP42898 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.7□□□□□ -0.06
MTHFRP42898 SERBP1P2-201ENST00000436888 1164 ntBASIC14.7□□□□□ -0.06
MTHFRP42898 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.7□□□□□ -0.06
MTHFRP42898 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.7□□□□□ -0.06
MTHFRP42898 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.7□□□□□ -0.06
MTHFRP42898 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.7□□□□□ -0.06
MTHFRP42898 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.7□□□□□ -0.06
MTHFRP42898 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.7□□□□□ -0.06
MTHFRP42898 AC132825.4-202ENST00000578792 434 ntBASIC14.7□□□□□ -0.06
MTHFRP42898 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.7□□□□□ -0.06
MTHFRP42898 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.7□□□□□ -0.06
MTHFRP42898 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.7□□□□□ -0.06
MTHFRP42898 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.7□□□□□ -0.06
MTHFRP42898 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.7□□□□□ -0.06
MTHFRP42898 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 INTS4P1-203ENST00000641008 3683 ntBASIC14.7□□□□□ -0.06
MTHFRP42898 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
MTHFRP42898 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.7□□□□□ -0.06
MTHFRP42898 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.7□□□□□ -0.06
MTHFRP42898 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.7□□□□□ -0.06
MTHFRP42898 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MTHFRP42898 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms