Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL591424.3-201ENST00000614278 872 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC17.53■□□□□ 0.4
COL15A1P39059 AL139424.3-202ENST00000641619 917 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COL15A1P39059 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.53■□□□□ 0.4
COL15A1P39059 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COL15A1P39059 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL15A1P39059 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL15A1P39059 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.53■□□□□ 0.4
COL15A1P39059 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
COL15A1P39059 AC117489.1-201ENST00000625169 3217 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.53■□□□□ 0.4
COL15A1P39059 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 AC068587.6-202ENST00000641839 5619 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 LINC01230-201ENST00000625222 3017 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COL15A1P39059 AC041040.1-201ENST00000425197 460 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.53■□□□□ 0.4
COL15A1P39059 AC120498.7-201ENST00000562876 330 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC17.53■□□□□ 0.4
COL15A1P39059 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC17.53■□□□□ 0.4
COL15A1P39059 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
COL15A1P39059 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC17.53■□□□□ 0.4
COL15A1P39059 BX322534.1-201ENST00000635574 241 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 AC215524.1-201ENST00000635696 241 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC17.52■□□□□ 0.4
COL15A1P39059 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL15A1P39059 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
COL15A1P39059 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL15A1P39059 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL15A1P39059 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
COL15A1P39059 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL15A1P39059 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
COL15A1P39059 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL15A1P39059 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.52■□□□□ 0.4
COL15A1P39059 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC17.52■□□□□ 0.4
COL15A1P39059 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
COL15A1P39059 AC008536.3-201ENST00000623282 1599 ntBASIC17.52■□□□□ 0.4
COL15A1P39059 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL15A1P39059 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.52■□□□□ 0.4
COL15A1P39059 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL15A1P39059 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.52■□□□□ 0.4
COL15A1P39059 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
COL15A1P39059 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL15A1P39059 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL15A1P39059 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL15A1P39059 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL15A1P39059 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
COL15A1P39059 AL157823.1-201ENST00000403727 628 ntBASIC17.52■□□□□ 0.39
COL15A1P39059 AC133141.1-201ENST00000443015 339 ntBASIC17.52■□□□□ 0.39
COL15A1P39059 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17.52■□□□□ 0.39
COL15A1P39059 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.52■□□□□ 0.39
COL15A1P39059 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.52■□□□□ 0.39
COL15A1P39059 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC17.52■□□□□ 0.39
COL15A1P39059 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.52■□□□□ 0.39
COL15A1P39059 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.52■□□□□ 0.39
COL15A1P39059 AC091304.3-201ENST00000566500 716 ntBASIC17.52■□□□□ 0.39
COL15A1P39059 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC17.52■□□□□ 0.39
COL15A1P39059 RN7SL605P-201ENST00000577229 281 ntBASIC17.52■□□□□ 0.39
COL15A1P39059 FBXO36P1-201ENST00000579006 471 ntBASIC17.52■□□□□ 0.39
COL15A1P39059 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.52■□□□□ 0.39
COL15A1P39059 AC011462.4-201ENST00000616866 449 ntBASIC17.52■□□□□ 0.39
COL15A1P39059 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC17.52■□□□□ 0.39
COL15A1P39059 MIR6816-201ENST00000620368 66 ntBASIC17.52■□□□□ 0.39
COL15A1P39059 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL15A1P39059 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL15A1P39059 AC020931.1-201ENST00000589622 1346 ntBASIC17.52■□□□□ 0.39
COL15A1P39059 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL15A1P39059 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL15A1P39059 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
COL15A1P39059 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL15A1P39059 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.51■□□□□ 0.39
COL15A1P39059 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL15A1P39059 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL15A1P39059 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.51■□□□□ 0.39
COL15A1P39059 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL15A1P39059 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL15A1P39059 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL15A1P39059 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
COL15A1P39059 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL15A1P39059 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.51■□□□□ 0.39
COL15A1P39059 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COL15A1P39059 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL15A1P39059 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
COL15A1P39059 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
COL15A1P39059 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms