Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PRSS3P1-201ENST00000503996 742 ntBASIC13.83□□□□□ -0.2
TRIM23P36406 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.83□□□□□ -0.2
TRIM23P36406 IGHV1-12-201ENST00000518307 205 ntBASIC13.83□□□□□ -0.2
TRIM23P36406 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.83□□□□□ -0.2
TRIM23P36406 AL009176.1-201ENST00000607876 650 ntBASIC13.83□□□□□ -0.2
TRIM23P36406 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TRIM23P36406 AC105137.3-201ENST00000617588 984 ntBASIC13.83□□□□□ -0.2
TRIM23P36406 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM23P36406 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
TRIM23P36406 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRIM23P36406 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 MST1P2-201ENST00000457982 2291 ntBASIC13.83□□□□□ -0.2
TRIM23P36406 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TRIM23P36406 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TRIM23P36406 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRIM23P36406 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRIM23P36406 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM23P36406 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 IL9RP3-201ENST00000442856 1674 ntBASIC13.82□□□□□ -0.2
TRIM23P36406 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM23P36406 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRIM23P36406 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRIM23P36406 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRIM23P36406 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM23P36406 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.82□□□□□ -0.2
TRIM23P36406 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.82□□□□□ -0.2
TRIM23P36406 LDHBP1-201ENST00000455730 1119 ntBASIC13.82□□□□□ -0.2
TRIM23P36406 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM23P36406 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.82□□□□□ -0.2
TRIM23P36406 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM23P36406 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.82□□□□□ -0.2
TRIM23P36406 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.82□□□□□ -0.2
TRIM23P36406 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.82□□□□□ -0.2
TRIM23P36406 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.82□□□□□ -0.2
TRIM23P36406 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.82□□□□□ -0.2
TRIM23P36406 AL049840.2-201ENST00000602722 535 ntBASIC13.82□□□□□ -0.2
TRIM23P36406 AL161773.1-201ENST00000624845 863 ntBASIC13.82□□□□□ -0.2
TRIM23P36406 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.82□□□□□ -0.2
TRIM23P36406 AL139424.3-202ENST00000641619 917 ntBASIC13.82□□□□□ -0.2
TRIM23P36406 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 AC008620.2-201ENST00000510294 1569 ntBASIC13.82□□□□□ -0.2
TRIM23P36406 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRIM23P36406 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.82□□□□□ -0.2
TRIM23P36406 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 AL928921.2-201ENST00000641325 2442 ntBASIC13.82□□□□□ -0.2
TRIM23P36406 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.82□□□□□ -0.2
TRIM23P36406 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
TRIM23P36406 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRIM23P36406 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.82□□□□□ -0.2
TRIM23P36406 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM23P36406 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRIM23P36406 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.81□□□□□ -0.2
TRIM23P36406 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TRIM23P36406 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM23P36406 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRIM23P36406 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM23P36406 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TRIM23P36406 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRIM23P36406 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM23P36406 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM23P36406 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.81□□□□□ -0.2
TRIM23P36406 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM23P36406 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM23P36406 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM23P36406 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM23P36406 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM23P36406 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRIM23P36406 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms