Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MED11-202ENST00000573708 802 ntTSL 2 BASIC18.5■□□□□ 0.55
USP6P35125 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC18.5■□□□□ 0.55
USP6P35125 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC18.5■□□□□ 0.55
USP6P35125 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC18.5■□□□□ 0.55
USP6P35125 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC18.5■□□□□ 0.55
USP6P35125 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC18.5■□□□□ 0.55
USP6P35125 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC18.49■□□□□ 0.55
USP6P35125 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC18.49■□□□□ 0.55
USP6P35125 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC18.49■□□□□ 0.55
USP6P35125 IGHVII-74-1-201ENST00000517572 241 ntBASIC18.49■□□□□ 0.55
USP6P35125 AC023051.2-201ENST00000541141 460 ntBASIC18.49■□□□□ 0.55
USP6P35125 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
USP6P35125 RN7SL162P-201ENST00000579233 292 ntBASIC18.49■□□□□ 0.55
USP6P35125 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC18.49■□□□□ 0.55
USP6P35125 NEK4P3-201ENST00000604859 544 ntBASIC18.49■□□□□ 0.55
USP6P35125 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC18.49■□□□□ 0.55
USP6P35125 PHF23-213ENST00000613632 850 ntTSL 5 BASIC18.49■□□□□ 0.55
USP6P35125 Z82244.1-201ENST00000631502 840 ntBASIC18.49■□□□□ 0.55
USP6P35125 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 WASH7P-201ENST00000488147 1351 ntBASIC18.49■□□□□ 0.55
USP6P35125 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC18.49■□□□□ 0.55
USP6P35125 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC18.49■□□□□ 0.55
USP6P35125 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
USP6P35125 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
USP6P35125 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
USP6P35125 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP6P35125 CFL1P6-201ENST00000400899 494 ntBASIC18.49■□□□□ 0.55
USP6P35125 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC18.49■□□□□ 0.55
USP6P35125 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC18.49■□□□□ 0.55
USP6P35125 AL773545.2-201ENST00000442149 472 ntBASIC18.49■□□□□ 0.55
USP6P35125 CDK4P1-201ENST00000454213 828 ntBASIC18.49■□□□□ 0.55
USP6P35125 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
USP6P35125 MARK2P17-201ENST00000498560 841 ntBASIC18.49■□□□□ 0.55
USP6P35125 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC18.49■□□□□ 0.55
USP6P35125 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC18.49■□□□□ 0.55
USP6P35125 RN7SL602P-201ENST00000578326 324 ntBASIC18.49■□□□□ 0.55
USP6P35125 RN7SL718P-201ENST00000581254 303 ntBASIC18.49■□□□□ 0.55
USP6P35125 AL357143.1-203ENST00000639750 881 ntBASIC18.49■□□□□ 0.55
USP6P35125 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC18.48■□□□□ 0.55
USP6P35125 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.48■□□□□ 0.55
USP6P35125 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
USP6P35125 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC18.48■□□□□ 0.55
USP6P35125 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
USP6P35125 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.48■□□□□ 0.55
USP6P35125 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
USP6P35125 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 AC007686.3-201ENST00000619017 3487 ntBASIC18.48■□□□□ 0.55
USP6P35125 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.48■□□□□ 0.55
USP6P35125 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
USP6P35125 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC18.48■□□□□ 0.55
USP6P35125 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 AC012358.2-201ENST00000430010 1434 ntBASIC18.48■□□□□ 0.55
USP6P35125 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP6P35125 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms