Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 AC009093.10-201ENST00000641956 1442 ntBASIC10.41□□□□□ -0.74
CKS2P33552 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 AC108024.1-201ENST00000626286 1721 ntBASIC10.41□□□□□ -0.74
CKS2P33552 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
CKS2P33552 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 AC022364.1-202ENST00000617468 2409 ntBASIC10.41□□□□□ -0.74
CKS2P33552 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
CKS2P33552 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 AC114501.2-201ENST00000439631 535 ntBASIC10.41□□□□□ -0.74
CKS2P33552 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 INE1-201ENST00000456273 945 ntBASIC10.41□□□□□ -0.74
CKS2P33552 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 AC027369.6-201ENST00000525520 931 ntBASIC10.41□□□□□ -0.74
CKS2P33552 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.41□□□□□ -0.74
CKS2P33552 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.41□□□□□ -0.74
CKS2P33552 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 AL512356.2-201ENST00000546955 174 ntBASIC10.41□□□□□ -0.74
CKS2P33552 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.41□□□□□ -0.74
CKS2P33552 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 AC138696.2-201ENST00000607376 223 ntBASIC10.41□□□□□ -0.74
CKS2P33552 BX640515.1-201ENST00000617215 977 ntBASIC10.41□□□□□ -0.74
CKS2P33552 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.41□□□□□ -0.74
CKS2P33552 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 PCDHB17P-202ENST00000623466 3066 ntBASIC10.41□□□□□ -0.74
CKS2P33552 PAM-203ENST00000346918 3302 ntTSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CKS2P33552 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CKS2P33552 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC10.4□□□□□ -0.74
CKS2P33552 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 AC020910.5-201ENST00000623668 1865 ntBASIC10.4□□□□□ -0.74
CKS2P33552 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CKS2P33552 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC10.4□□□□□ -0.74
CKS2P33552 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CKS2P33552 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms