Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
COL4A5P29400 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
COL4A5P29400 AC124319.4-201ENST00000622931 2161 ntBASIC16.27■□□□□ 0.2
COL4A5P29400 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
COL4A5P29400 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A5P29400 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
COL4A5P29400 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.27■□□□□ 0.2
COL4A5P29400 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A5P29400 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A5P29400 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A5P29400 AC008038.1-201ENST00000634247 1314 ntBASIC16.27■□□□□ 0.19
COL4A5P29400 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A5P29400 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A5P29400 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A5P29400 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A5P29400 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
COL4A5P29400 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC16.27■□□□□ 0.19
COL4A5P29400 MARCKSL1P2-201ENST00000401037 976 ntBASIC16.27■□□□□ 0.19
COL4A5P29400 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC16.27■□□□□ 0.19
COL4A5P29400 AC008267.3-201ENST00000448776 712 ntBASIC16.27■□□□□ 0.19
COL4A5P29400 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC16.27■□□□□ 0.19
COL4A5P29400 RPL3P9-201ENST00000463217 1183 ntBASIC16.27■□□□□ 0.19
COL4A5P29400 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC16.27■□□□□ 0.19
COL4A5P29400 HAX1-211ENST00000532105 771 ntTSL 3 BASIC16.27■□□□□ 0.19
COL4A5P29400 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC16.27■□□□□ 0.19
COL4A5P29400 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC16.27■□□□□ 0.19
COL4A5P29400 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC16.27■□□□□ 0.19
COL4A5P29400 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A5P29400 BX510359.7-201ENST00000619819 630 ntBASIC16.27■□□□□ 0.19
COL4A5P29400 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC16.27■□□□□ 0.19
COL4A5P29400 AL157996.1-201ENST00000624684 2299 ntBASIC16.27■□□□□ 0.19
COL4A5P29400 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A5P29400 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COL4A5P29400 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.26■□□□□ 0.19
COL4A5P29400 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COL4A5P29400 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC16.26■□□□□ 0.19
COL4A5P29400 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A5P29400 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC16.26■□□□□ 0.19
COL4A5P29400 AC004910.1-201ENST00000433493 787 ntBASIC16.26■□□□□ 0.19
COL4A5P29400 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A5P29400 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 CXXC1P1-202ENST00000489409 1212 ntBASIC16.26■□□□□ 0.19
COL4A5P29400 AC099343.1-201ENST00000513481 609 ntBASIC16.26■□□□□ 0.19
COL4A5P29400 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A5P29400 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC16.26■□□□□ 0.19
COL4A5P29400 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC16.26■□□□□ 0.19
COL4A5P29400 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC16.26■□□□□ 0.19
COL4A5P29400 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A5P29400 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 AL031768.1-201ENST00000606542 701 ntBASIC16.26■□□□□ 0.19
COL4A5P29400 AC092535.4-201ENST00000609548 397 ntBASIC16.26■□□□□ 0.19
COL4A5P29400 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC16.26■□□□□ 0.19
COL4A5P29400 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A5P29400 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
COL4A5P29400 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A5P29400 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 KRT8P24-201ENST00000560290 1559 ntBASIC16.26■□□□□ 0.19
COL4A5P29400 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A5P29400 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A5P29400 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC16.26■□□□□ 0.19
COL4A5P29400 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 CD9-212ENST00000610354 1315 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A5P29400 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COL4A5P29400 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
COL4A5P29400 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A5P29400 RNA5SP407-201ENST00000410275 110 ntBASIC16.25■□□□□ 0.19
COL4A5P29400 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A5P29400 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A5P29400 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC16.25■□□□□ 0.19
COL4A5P29400 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC16.25■□□□□ 0.19
COL4A5P29400 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A5P29400 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms