Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MARK2P5-201ENST00000507649 634 ntBASIC12.11□□□□□ -0.47
CCL1P22362 AC005740.1-201ENST00000515639 522 ntBASIC12.11□□□□□ -0.47
CCL1P22362 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CCL1P22362 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.11□□□□□ -0.47
CCL1P22362 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.11□□□□□ -0.47
CCL1P22362 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 AC013355.1-201ENST00000562625 723 ntBASIC12.11□□□□□ -0.47
CCL1P22362 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.11□□□□□ -0.47
CCL1P22362 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.11□□□□□ -0.47
CCL1P22362 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.11□□□□□ -0.47
CCL1P22362 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CCL1P22362 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.11□□□□□ -0.47
CCL1P22362 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
CCL1P22362 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.11□□□□□ -0.47
CCL1P22362 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CCL1P22362 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
CCL1P22362 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.11□□□□□ -0.47
CCL1P22362 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
CCL1P22362 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CCL1P22362 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 RNA5SP359-201ENST00000364838 113 ntBASIC12.1□□□□□ -0.47
CCL1P22362 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CCL1P22362 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 OR8T1P-201ENST00000421347 918 ntBASIC12.1□□□□□ -0.47
CCL1P22362 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.1□□□□□ -0.47
CCL1P22362 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.1□□□□□ -0.47
CCL1P22362 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.1□□□□□ -0.47
CCL1P22362 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.1□□□□□ -0.47
CCL1P22362 RPL13AP20-201ENST00000459725 609 ntBASIC12.1□□□□□ -0.47
CCL1P22362 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 HILS1-202ENST00000545329 423 ntBASIC12.1□□□□□ -0.47
CCL1P22362 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.1□□□□□ -0.47
CCL1P22362 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 MIR4259-201ENST00000584466 101 ntBASIC12.1□□□□□ -0.47
CCL1P22362 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
CCL1P22362 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
CCL1P22362 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCL1P22362 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.1□□□□□ -0.47
CCL1P22362 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.09□□□□□ -0.47
CCL1P22362 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.09□□□□□ -0.47
CCL1P22362 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CCL1P22362 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms