Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 PPT1-213ENST00000641319 2388 ntBASIC12.78□□□□□ -0.36
FREM3P0C091 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
FREM3P0C091 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.78□□□□□ -0.36
FREM3P0C091 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 CICP17-201ENST00000418553 2377 ntBASIC12.78□□□□□ -0.36
FREM3P0C091 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.78□□□□□ -0.36
FREM3P0C091 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.78□□□□□ -0.36
FREM3P0C091 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 BX679664.3-201ENST00000414070 555 ntBASIC12.78□□□□□ -0.36
FREM3P0C091 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.78□□□□□ -0.36
FREM3P0C091 AC113935.1-201ENST00000471722 555 ntBASIC12.78□□□□□ -0.36
FREM3P0C091 AC104784.1-201ENST00000473096 294 ntBASIC12.78□□□□□ -0.36
FREM3P0C091 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.78□□□□□ -0.36
FREM3P0C091 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.78□□□□□ -0.36
FREM3P0C091 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 NPM1P43-201ENST00000558669 786 ntBASIC12.78□□□□□ -0.36
FREM3P0C091 HERC2P11-201ENST00000562845 725 ntBASIC12.78□□□□□ -0.36
FREM3P0C091 AC100756.2-201ENST00000569537 736 ntBASIC12.78□□□□□ -0.36
FREM3P0C091 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.78□□□□□ -0.36
FREM3P0C091 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.78□□□□□ -0.36
FREM3P0C091 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
FREM3P0C091 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
FREM3P0C091 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
FREM3P0C091 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.78□□□□□ -0.36
FREM3P0C091 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.78□□□□□ -0.36
FREM3P0C091 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FREM3P0C091 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.77□□□□□ -0.36
FREM3P0C091 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
FREM3P0C091 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FREM3P0C091 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.77□□□□□ -0.36
FREM3P0C091 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
FREM3P0C091 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.77□□□□□ -0.36
FREM3P0C091 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FREM3P0C091 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.77□□□□□ -0.36
FREM3P0C091 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
FREM3P0C091 RN7SL788P-201ENST00000460504 316 ntBASIC12.77□□□□□ -0.36
FREM3P0C091 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.77□□□□□ -0.36
FREM3P0C091 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.77□□□□□ -0.36
FREM3P0C091 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.77□□□□□ -0.36
FREM3P0C091 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.36
FREM3P0C091 RN7SL736P-201ENST00000613111 269 ntBASIC12.77□□□□□ -0.36
FREM3P0C091 BAP1-211ENST00000615113 489 ntBASIC12.77□□□□□ -0.36
FREM3P0C091 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FREM3P0C091 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.77□□□□□ -0.36
FREM3P0C091 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
FREM3P0C091 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.77□□□□□ -0.36
FREM3P0C091 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FREM3P0C091 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.77□□□□□ -0.36
FREM3P0C091 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
FREM3P0C091 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
FREM3P0C091 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
FREM3P0C091 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FREM3P0C091 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms