Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TPM2P07951 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM2P07951 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM2P07951 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TPM2P07951 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TPM2P07951 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.15■□□□□ 0.18
TPM2P07951 ELK1P1-201ENST00000485699 580 ntBASIC16.15■□□□□ 0.18
TPM2P07951 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM2P07951 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
TPM2P07951 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TPM2P07951 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM2P07951 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.15■□□□□ 0.18
TPM2P07951 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 CHCHD2P3-201ENST00000603038 451 ntBASIC16.15■□□□□ 0.18
TPM2P07951 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TPM2P07951 AJ011932.1-201ENST00000621707 465 ntBASIC16.15■□□□□ 0.18
TPM2P07951 ENPP7P14-201ENST00000621765 1040 ntBASIC16.15■□□□□ 0.18
TPM2P07951 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TPM2P07951 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TPM2P07951 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TPM2P07951 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TPM2P07951 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.15■□□□□ 0.18
TPM2P07951 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TPM2P07951 CLUHP2-201ENST00000426660 1303 ntBASIC16.15■□□□□ 0.18
TPM2P07951 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.15■□□□□ 0.18
TPM2P07951 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM2P07951 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM2P07951 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TPM2P07951 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.14■□□□□ 0.18
TPM2P07951 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM2P07951 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TPM2P07951 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TPM2P07951 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 TP73-203ENST00000357733 4899 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM2P07951 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TPM2P07951 PMS2P2-201ENST00000425039 1128 ntBASIC16.14■□□□□ 0.17
TPM2P07951 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.14■□□□□ 0.17
TPM2P07951 FAM207CP-201ENST00000443486 507 ntBASIC16.14■□□□□ 0.17
TPM2P07951 TSPY16P-201ENST00000449843 468 ntBASIC16.14■□□□□ 0.17
TPM2P07951 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM2P07951 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 BX088702.1-201ENST00000610784 235 ntBASIC16.14■□□□□ 0.17
TPM2P07951 AC138466.3-201ENST00000619983 221 ntBASIC16.14■□□□□ 0.17
TPM2P07951 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM2P07951 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM2P07951 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TPM2P07951 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.14■□□□□ 0.17
TPM2P07951 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM2P07951 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TPM2P07951 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC16.13■□□□□ 0.17
TPM2P07951 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM2P07951 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM2P07951 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms