Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBB4AP04350 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBB4AP04350 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TUBB4AP04350 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TUBB4AP04350 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TUBB4AP04350 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC15.14■□□□□ 0.01
TUBB4AP04350 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBB4AP04350 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TUBB4AP04350 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBB4AP04350 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 KCTD21-AS1-207ENST00000600795 1549 ntBASIC15.13■□□□□ 0.01
TUBB4AP04350 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 MIR770-201ENST00000390219 98 ntBASIC15.13■□□□□ 0.01
TUBB4AP04350 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.13■□□□□ 0.01
TUBB4AP04350 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.13■□□□□ 0.01
TUBB4AP04350 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.13■□□□□ 0.01
TUBB4AP04350 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.13■□□□□ 0.01
TUBB4AP04350 CICP12-201ENST00000455801 843 ntBASIC15.13■□□□□ 0.01
TUBB4AP04350 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 AL391280.1-201ENST00000506969 1062 ntBASIC15.13■□□□□ 0.01
TUBB4AP04350 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TUBB4AP04350 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.13■□□□□ 0.01
TUBB4AP04350 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 ENPP7P14-201ENST00000621765 1040 ntBASIC15.13■□□□□ 0.01
TUBB4AP04350 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBB4AP04350 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBB4AP04350 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBB4AP04350 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TUBB4AP04350 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBB4AP04350 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBB4AP04350 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TUBB4AP04350 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBB4AP04350 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TUBB4AP04350 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms