Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN6O15212 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PFDN6O15212 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN6O15212 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.21□□□□□ -0.13
PFDN6O15212 VDAC1P1-201ENST00000439229 848 ntBASIC14.21□□□□□ -0.13
PFDN6O15212 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.21□□□□□ -0.13
PFDN6O15212 PFN1P12-201ENST00000455938 534 ntBASIC14.21□□□□□ -0.13
PFDN6O15212 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.21□□□□□ -0.13
PFDN6O15212 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
PFDN6O15212 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.21□□□□□ -0.13
PFDN6O15212 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.21□□□□□ -0.13
PFDN6O15212 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.21□□□□□ -0.13
PFDN6O15212 MIR4259-201ENST00000584466 101 ntBASIC14.21□□□□□ -0.13
PFDN6O15212 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.21□□□□□ -0.13
PFDN6O15212 AC091271.1-201ENST00000611877 1162 ntBASIC14.21□□□□□ -0.13
PFDN6O15212 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN6O15212 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.21□□□□□ -0.13
PFDN6O15212 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN6O15212 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN6O15212 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN6O15212 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN6O15212 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
PFDN6O15212 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN6O15212 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PFDN6O15212 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.21□□□□□ -0.13
PFDN6O15212 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.14
PFDN6O15212 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN6O15212 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN6O15212 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN6O15212 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN6O15212 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.21□□□□□ -0.14
PFDN6O15212 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN6O15212 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN6O15212 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
PFDN6O15212 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.21□□□□□ -0.14
PFDN6O15212 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PFDN6O15212 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.21□□□□□ -0.14
PFDN6O15212 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN6O15212 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN6O15212 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN6O15212 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PFDN6O15212 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 LINC02486-201ENST00000604157 3000 ntBASIC14.2□□□□□ -0.14
PFDN6O15212 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.2□□□□□ -0.14
PFDN6O15212 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
PFDN6O15212 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
PFDN6O15212 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PFDN6O15212 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PFDN6O15212 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.2□□□□□ -0.14
PFDN6O15212 BRWD1P1-201ENST00000401091 371 ntBASIC14.2□□□□□ -0.14
PFDN6O15212 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.2□□□□□ -0.14
PFDN6O15212 AC092580.1-201ENST00000433998 658 ntBASIC14.2□□□□□ -0.14
PFDN6O15212 AL591846.1-201ENST00000451736 433 ntBASIC14.2□□□□□ -0.14
PFDN6O15212 AC126915.1-201ENST00000522847 1038 ntBASIC14.2□□□□□ -0.14
PFDN6O15212 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.2□□□□□ -0.14
PFDN6O15212 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.2□□□□□ -0.14
PFDN6O15212 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
PFDN6O15212 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.2□□□□□ -0.14
PFDN6O15212 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 AL359881.2-201ENST00000602973 570 ntBASIC14.2□□□□□ -0.14
PFDN6O15212 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.2□□□□□ -0.14
PFDN6O15212 AP002353.1-201ENST00000528257 1599 ntBASIC14.2□□□□□ -0.14
PFDN6O15212 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC14.2□□□□□ -0.14
PFDN6O15212 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.2□□□□□ -0.14
PFDN6O15212 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.2□□□□□ -0.14
PFDN6O15212 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN6O15212 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN6O15212 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.2□□□□□ -0.14
PFDN6O15212 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms