Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB9F8W1W9 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPB9F8W1W9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB9F8W1W9 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB9F8W1W9 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPB9F8W1W9 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB9F8W1W9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AL358781.1-202ENST00000321081 1360 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 MIR557-201ENST00000385239 98 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AC005077.2-201ENST00000449786 690 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AL353637.1-201ENST00000451571 732 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AC012618.1-201ENST00000461223 412 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 ACTG1P17-201ENST00000558391 1119 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AC242376.1-201ENST00000559033 726 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AC020922.3-201ENST00000595064 547 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AL356740.1-201ENST00000602192 1297 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AF254983.2-201ENST00000612331 135 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 MIR6787-201ENST00000616675 61 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 ZNF493-208ENST00000599461 1769 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 AC126335.2-201ENST00000623362 4637 ntBASIC12.84□□□□□ -0.35
NPIPB9F8W1W9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
NPIPB9F8W1W9 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NPIPB9F8W1W9 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.83□□□□□ -0.35
NPIPB9F8W1W9 AL355102.3-201ENST00000554299 1678 ntBASIC12.83□□□□□ -0.35
NPIPB9F8W1W9 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.83□□□□□ -0.35
NPIPB9F8W1W9 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NPIPB9F8W1W9 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 AC099521.3-201ENST00000624251 2938 ntBASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 NRADDP-202ENST00000641269 1585 ntBASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 LINC00638-201ENST00000555578 2518 ntBASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 AC098934.1-203ENST00000442868 1262 ntBASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 AC007279.1-201ENST00000448547 837 ntBASIC12.83□□□□□ -0.36
NPIPB9F8W1W9 DUTP3-201ENST00000450025 415 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms