Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 AC005324.6-201ENST00000587972 613 ntBASIC14.37□□□□□ -0.11
CCDC78A2IDD5 AC090164.2-201ENST00000611487 516 ntBASIC14.37□□□□□ -0.11
CCDC78A2IDD5 AL591471.1-201ENST00000621855 229 ntBASIC14.37□□□□□ -0.11
CCDC78A2IDD5 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 CICP8-201ENST00000455800 2813 ntBASIC14.37□□□□□ -0.11
CCDC78A2IDD5 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AC104306.2-201ENST00000451877 341 ntBASIC14.36□□□□□ -0.11
CCDC78A2IDD5 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AL023803.2-201ENST00000620080 638 ntBASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AC004923.1-202ENST00000642106 209 ntBASIC14.36□□□□□ -0.11
CCDC78A2IDD5 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC78A2IDD5 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 CICP20-201ENST00000443330 2801 ntBASIC14.35□□□□□ -0.11
CCDC78A2IDD5 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC78A2IDD5 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms