Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 AC100827.2-201ENST00000563214 1194 ntBASIC13.31□□□□□ -0.28
IFT52Q9Y366 AC124068.2-201ENST00000569473 1109 ntBASIC13.31□□□□□ -0.28
IFT52Q9Y366 AL591471.1-201ENST00000621855 229 ntBASIC13.31□□□□□ -0.28
IFT52Q9Y366 AC090386.2-201ENST00000623010 1039 ntBASIC13.31□□□□□ -0.28
IFT52Q9Y366 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 AC004899.2-201ENST00000622993 3860 ntBASIC13.3□□□□□ -0.28
IFT52Q9Y366 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 CROCCP4-201ENST00000457096 498 ntBASIC13.3□□□□□ -0.28
IFT52Q9Y366 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.3□□□□□ -0.28
IFT52Q9Y366 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 AL512310.5-201ENST00000551999 515 ntBASIC13.3□□□□□ -0.28
IFT52Q9Y366 AC140658.4-201ENST00000561990 352 ntBASIC13.3□□□□□ -0.28
IFT52Q9Y366 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IFT52Q9Y366 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
IFT52Q9Y366 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
IFT52Q9Y366 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms