Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RN7SL713P-201ENST00000582127 302 ntBASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 SNORA50.1-201ENST00000628590 135 ntBASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 TNRC18P1-201ENST00000502875 3650 ntBASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 SHC1P1-201ENST00000425230 1745 ntBASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 AGGF1P10-201ENST00000635005 2191 ntBASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 AC002350.2-201ENST00000623894 1828 ntBASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 AL355864.2-201ENST00000447420 863 ntBASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 AL590640.2-201ENST00000457038 527 ntBASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 COX5BP1-201ENST00000507622 393 ntBASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 WASH4P-201ENST00000564273 1246 ntBASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 GNRHR2-203ENST00000581100 1187 ntBASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2D4Q9Y2X8 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms