Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AC084752.1-201ENST00000509766 622 ntBASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AP003398.1-201ENST00000531124 318 ntBASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 TBC1D27-202ENST00000424239 1573 ntBASIC12.4□□□□□ -0.43
KIAA1549Q9HCM3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
KIAA1549Q9HCM3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
KIAA1549Q9HCM3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
KIAA1549Q9HCM3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
KIAA1549Q9HCM3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.4□□□□□ -0.43
KIAA1549Q9HCM3 RNVU1-8-201ENST00000364272 125 ntBASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 AC093909.3-201ENST00000504783 336 ntBASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 AC093826.1-201ENST00000508655 993 ntBASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 AC073210.1-201ENST00000414799 232 ntBASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 RN7SKP155-201ENST00000516031 288 ntBASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
KIAA1549Q9HCM3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms