Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 OS9-218ENST00000551035 2246 ntTSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
VGLL1Q99990 AL391647.1-201ENST00000395664 511 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
VGLL1Q99990 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC10.79□□□□□ -0.68
VGLL1Q99990 WDR53-203ENST00000429115 683 ntTSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 FAM197Y7-201ENST00000432892 766 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 SKA2-202ENST00000437036 625 ntTSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 AK2P2-201ENST00000439142 405 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 BCRP2-202ENST00000447763 634 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 INE1-201ENST00000456273 945 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC10.79□□□□□ -0.68
VGLL1Q99990 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC10.79□□□□□ -0.68
VGLL1Q99990 BCRP6-201ENST00000510112 632 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC10.79□□□□□ -0.68
VGLL1Q99990 BCRP7-201ENST00000511549 544 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC10.79□□□□□ -0.68
VGLL1Q99990 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC10.79□□□□□ -0.68
VGLL1Q99990 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 AC073413.1-201ENST00000603927 732 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 KRT8P4-201ENST00000509735 1454 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 PDIA3P1-201ENST00000471856 1510 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 TMBIM7P-202ENST00000641474 1516 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VGLL1Q99990 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
VGLL1Q99990 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC10.78□□□□□ -0.68
VGLL1Q99990 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.78□□□□□ -0.68
VGLL1Q99990 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 SNX21-203ENST00000372541 771 ntTSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 AC005229.1-201ENST00000392885 409 ntBASIC10.78□□□□□ -0.68
VGLL1Q99990 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC10.78□□□□□ -0.68
VGLL1Q99990 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 AL136309.1-201ENST00000403917 691 ntBASIC10.78□□□□□ -0.68
VGLL1Q99990 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.78□□□□□ -0.68
VGLL1Q99990 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC10.78□□□□□ -0.68
VGLL1Q99990 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC10.78□□□□□ -0.68
VGLL1Q99990 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC10.78□□□□□ -0.68
VGLL1Q99990 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.78□□□□□ -0.68
VGLL1Q99990 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.78□□□□□ -0.68
VGLL1Q99990 POLD4-211ENST00000539074 714 ntTSL 3 BASIC10.78□□□□□ -0.68
VGLL1Q99990 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC10.78□□□□□ -0.68
VGLL1Q99990 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC10.78□□□□□ -0.68
VGLL1Q99990 AL136301.1-201ENST00000615830 422 ntBASIC10.78□□□□□ -0.68
VGLL1Q99990 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC10.78□□□□□ -0.68
VGLL1Q99990 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC10.78□□□□□ -0.68
VGLL1Q99990 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms