Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S1Q92572 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S1Q92572 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.46□□□□□ -0.41
AP3S1Q92572 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC12.46□□□□□ -0.41
AP3S1Q92572 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S1Q92572 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 AL590824.1-201ENST00000403828 1349 ntBASIC12.46□□□□□ -0.41
AP3S1Q92572 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.46□□□□□ -0.41
AP3S1Q92572 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AP3S1Q92572 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S1Q92572 ACTBP8-201ENST00000403258 1108 ntBASIC12.46□□□□□ -0.41
AP3S1Q92572 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S1Q92572 SSR4P1-201ENST00000415143 412 ntBASIC12.46□□□□□ -0.41
AP3S1Q92572 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S1Q92572 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.46□□□□□ -0.41
AP3S1Q92572 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.46□□□□□ -0.41
AP3S1Q92572 MTDHP5-201ENST00000598980 586 ntBASIC12.46□□□□□ -0.41
AP3S1Q92572 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.46□□□□□ -0.41
AP3S1Q92572 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
AP3S1Q92572 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S1Q92572 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S1Q92572 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.46□□□□□ -0.42
AP3S1Q92572 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.46□□□□□ -0.42
AP3S1Q92572 AC020910.5-201ENST00000623668 1865 ntBASIC12.46□□□□□ -0.42
AP3S1Q92572 AC092028.1-202ENST00000641483 3547 ntBASIC12.46□□□□□ -0.42
AP3S1Q92572 AC092028.1-201ENST00000641781 3540 ntBASIC12.46□□□□□ -0.42
AP3S1Q92572 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.46□□□□□ -0.42
AP3S1Q92572 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S1Q92572 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
AP3S1Q92572 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S1Q92572 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S1Q92572 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
AP3S1Q92572 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S1Q92572 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
AP3S1Q92572 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S1Q92572 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S1Q92572 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S1Q92572 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
AP3S1Q92572 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S1Q92572 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
AP3S1Q92572 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
AP3S1Q92572 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
AP3S1Q92572 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.45□□□□□ -0.42
AP3S1Q92572 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S1Q92572 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
AP3S1Q92572 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.45□□□□□ -0.42
AP3S1Q92572 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.45□□□□□ -0.42
AP3S1Q92572 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.45□□□□□ -0.42
AP3S1Q92572 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.45□□□□□ -0.42
AP3S1Q92572 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S1Q92572 AC023141.5-201ENST00000458585 616 ntBASIC12.45□□□□□ -0.42
AP3S1Q92572 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.45□□□□□ -0.42
AP3S1Q92572 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms