Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 U3.5-201ENST00000363448 216 ntBASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 AC007679.1-201ENST00000458609 502 ntBASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 OR2A1-AS1-203ENST00000468575 568 ntBASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 AC112694.1-202ENST00000540985 943 ntBASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 Z84721.1-201ENST00000438841 372 ntBASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 KF455155.1-201ENST00000604493 303 ntBASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CCDC168Q8NDH2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AL591499.1-201ENST00000307155 1153 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 MIR632-201ENST00000385193 94 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 SRP9P1-201ENST00000445874 261 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 RN7SL487P-201ENST00000468140 344 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 RN7SL363P-201ENST00000482412 273 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 CD44-224ENST00000526669 870 ntTSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 KRT127P-201ENST00000547183 433 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 METTL7AP1-201ENST00000547343 496 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 PCTP-206ENST00000573500 919 ntTSL 3 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AC239600.1-201ENST00000603201 462 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AL606760.3-201ENST00000569869 3591 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms