Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 AC020658.7-201ENST00000624274 2442 ntBASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 AL591122.2-201ENST00000624125 1853 ntBASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 KRT18P9-201ENST00000604826 1300 ntBASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 LINC02486-201ENST00000604157 3000 ntBASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 AL583805.1-201ENST00000391389 531 ntBASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 ALG1L13P-202ENST00000519320 584 ntBASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 AC084346.2-201ENST00000607097 949 ntBASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 KRT8P24-201ENST00000560290 1559 ntBASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD3Q6PCD5 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 TMEM198B-204ENST00000484016 896 ntBASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 KRT8P1-201ENST00000557533 1207 ntBASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms