Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.08□□□□□ -0.31
H3F3CQ6NXT2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
H3F3CQ6NXT2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.08□□□□□ -0.31
H3F3CQ6NXT2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
H3F3CQ6NXT2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 HIST2H2BA-201ENST00000412169 381 ntBASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 HMGA1P1-201ENST00000415560 1062 ntBASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 SCARNA12-201ENST00000459155 270 ntBASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 RN7SL455P-201ENST00000580629 282 ntBASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AC007250.1-201ENST00000608934 338 ntBASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AP003419.4-201ENST00000616071 517 ntBASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3CQ6NXT2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 AC027601.5-201ENST00000624065 2482 ntBASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 AL354861.1-201ENST00000445213 355 ntBASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 LDHBP1-201ENST00000455730 1119 ntBASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 RN7SL8P-201ENST00000461771 266 ntBASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 HERC2P11-201ENST00000562845 725 ntBASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 AC100756.2-201ENST00000569537 736 ntBASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 AC005618.3-201ENST00000624928 458 ntBASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms