Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.99■□□□□ 0.63
CGNL1Q0VF96 AC226150.1-201ENST00000544259 466 ntBASIC18.99■□□□□ 0.63
CGNL1Q0VF96 BATF-202ENST00000555504 361 ntTSL 2 BASIC18.99■□□□□ 0.63
CGNL1Q0VF96 AC141586.1-203ENST00000567242 366 ntBASIC18.99■□□□□ 0.63
CGNL1Q0VF96 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.99■□□□□ 0.63
CGNL1Q0VF96 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CGNL1Q0VF96 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.99■□□□□ 0.63
CGNL1Q0VF96 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.99■□□□□ 0.63
CGNL1Q0VF96 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CGNL1Q0VF96 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CGNL1Q0VF96 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 RDX-218ENST00000544551 4117 ntTSL 2 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 ACTG1P19-201ENST00000418987 1116 ntBASIC18.98■□□□□ 0.63
CGNL1Q0VF96 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 EEF1GP8-201ENST00000506566 1154 ntBASIC18.98■□□□□ 0.63
CGNL1Q0VF96 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.98■□□□□ 0.63
CGNL1Q0VF96 CR392039.2-201ENST00000623182 509 ntBASIC18.98■□□□□ 0.63
CGNL1Q0VF96 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 BEND3P1-201ENST00000421591 1944 ntBASIC18.97■□□□□ 0.63
CGNL1Q0VF96 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 GGTLC4P-201ENST00000402176 664 ntBASIC18.97■□□□□ 0.63
CGNL1Q0VF96 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 MIR1307-201ENST00000408840 149 ntBASIC18.97■□□□□ 0.63
CGNL1Q0VF96 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 KRT18P62-201ENST00000446618 1287 ntBASIC18.97■□□□□ 0.63
CGNL1Q0VF96 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 MIR4326-201ENST00000582203 59 ntBASIC18.97■□□□□ 0.63
CGNL1Q0VF96 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 FO393412.1-201ENST00000619841 382 ntBASIC18.97■□□□□ 0.63
CGNL1Q0VF96 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGNL1Q0VF96 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 NRADDP-202ENST00000641269 1585 ntBASIC18.96■□□□□ 0.63
CGNL1Q0VF96 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms