Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.16□□□□□ -0.46
AP3S2P59780 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 AL662799.1-202ENST00000614205 422 ntBASIC12.16□□□□□ -0.46
AP3S2P59780 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.16□□□□□ -0.46
AP3S2P59780 SNORA50.1-201ENST00000628590 135 ntBASIC12.16□□□□□ -0.46
AP3S2P59780 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
AP3S2P59780 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 DNM1P41-201ENST00000623634 3350 ntBASIC12.16□□□□□ -0.46
AP3S2P59780 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S2P59780 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
AP3S2P59780 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S2P59780 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S2P59780 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S2P59780 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
AP3S2P59780 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
AP3S2P59780 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 AC124319.4-201ENST00000622931 2161 ntBASIC12.15□□□□□ -0.46
AP3S2P59780 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S2P59780 AP002008.2-201ENST00000635926 4870 ntBASIC12.15□□□□□ -0.46
AP3S2P59780 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S2P59780 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S2P59780 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S2P59780 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 AL512356.2-201ENST00000546955 174 ntBASIC12.15□□□□□ -0.46
AP3S2P59780 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.15□□□□□ -0.46
AP3S2P59780 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.15□□□□□ -0.46
AP3S2P59780 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 AC073592.8-201ENST00000624126 511 ntBASIC12.15□□□□□ -0.46
AP3S2P59780 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
AP3S2P59780 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S2P59780 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
AP3S2P59780 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.15□□□□□ -0.47
AP3S2P59780 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.15□□□□□ -0.47
AP3S2P59780 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
AP3S2P59780 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
AP3S2P59780 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
AP3S2P59780 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.15□□□□□ -0.47
AP3S2P59780 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 PCDHB17P-202ENST00000623466 3066 ntBASIC12.14□□□□□ -0.47
AP3S2P59780 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
AP3S2P59780 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 DDX12P-201ENST00000432996 2947 ntBASIC12.14□□□□□ -0.47
AP3S2P59780 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.14□□□□□ -0.47
AP3S2P59780 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms