Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPT1AP50416 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CPT1AP50416 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.46■□□□□ 0.06
CPT1AP50416 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.46■□□□□ 0.06
CPT1AP50416 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
CPT1AP50416 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CPT1AP50416 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CPT1AP50416 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CPT1AP50416 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.45■□□□□ 0.06
CPT1AP50416 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CPT1AP50416 SIRPB3P-201ENST00000340424 1216 ntBASIC15.45■□□□□ 0.06
CPT1AP50416 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.45■□□□□ 0.06
CPT1AP50416 ALG1L7P-201ENST00000502317 768 ntBASIC15.45■□□□□ 0.06
CPT1AP50416 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.45■□□□□ 0.06
CPT1AP50416 AC023968.2-201ENST00000560593 1049 ntBASIC15.45■□□□□ 0.06
CPT1AP50416 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.45■□□□□ 0.06
CPT1AP50416 EIF5AP2-201ENST00000585668 1047 ntBASIC15.45■□□□□ 0.06
CPT1AP50416 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.45■□□□□ 0.06
CPT1AP50416 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.45■□□□□ 0.06
CPT1AP50416 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.45■□□□□ 0.06
CPT1AP50416 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CPT1AP50416 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CPT1AP50416 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.45■□□□□ 0.06
CPT1AP50416 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.45■□□□□ 0.06
CPT1AP50416 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPT1AP50416 TSPY26P-202ENST00000565928 3884 ntBASIC15.44■□□□□ 0.06
CPT1AP50416 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15.44■□□□□ 0.06
CPT1AP50416 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CPT1AP50416 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 AC041040.1-201ENST00000425197 460 ntBASIC15.44■□□□□ 0.06
CPT1AP50416 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CPT1AP50416 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.44■□□□□ 0.06
CPT1AP50416 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.44■□□□□ 0.06
CPT1AP50416 AC007279.1-201ENST00000448547 837 ntBASIC15.44■□□□□ 0.06
CPT1AP50416 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 AC078814.4-201ENST00000546650 327 ntBASIC15.44■□□□□ 0.06
CPT1AP50416 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CPT1AP50416 AC026336.4-201ENST00000624565 1050 ntBASIC15.44■□□□□ 0.06
CPT1AP50416 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 AC061965.1-201ENST00000560524 1465 ntBASIC15.44■□□□□ 0.06
CPT1AP50416 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 AC140479.7-201ENST00000636301 2332 ntBASIC15.44■□□□□ 0.06
CPT1AP50416 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 Z98885.3-201ENST00000624882 1757 ntBASIC15.44■□□□□ 0.06
CPT1AP50416 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPT1AP50416 AP002414.2-201ENST00000591780 3365 ntBASIC15.44■□□□□ 0.06
CPT1AP50416 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.44■□□□□ 0.06
CPT1AP50416 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
CPT1AP50416 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CPT1AP50416 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.43■□□□□ 0.06
CPT1AP50416 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.43■□□□□ 0.06
CPT1AP50416 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms