Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.94□□□□□ -0.34
CENPAP49450 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.94□□□□□ -0.34
CENPAP49450 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CENPAP49450 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CENPAP49450 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.93□□□□□ -0.34
CENPAP49450 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.93□□□□□ -0.34
CENPAP49450 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.93□□□□□ -0.34
CENPAP49450 KRT90P-201ENST00000549264 1064 ntBASIC12.93□□□□□ -0.34
CENPAP49450 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CENPAP49450 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.93□□□□□ -0.34
CENPAP49450 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CENPAP49450 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 CU639417.3-201ENST00000624240 1404 ntBASIC12.93□□□□□ -0.34
CENPAP49450 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.93□□□□□ -0.34
CENPAP49450 FAM90A12P-201ENST00000519497 2375 ntBASIC12.93□□□□□ -0.34
CENPAP49450 FAM90A24P-201ENST00000520792 2369 ntBASIC12.93□□□□□ -0.34
CENPAP49450 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CENPAP49450 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 AC023794.5-201ENST00000564380 2157 ntBASIC12.93□□□□□ -0.34
CENPAP49450 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.93□□□□□ -0.34
CENPAP49450 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CENPAP49450 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CENPAP49450 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC12.92□□□□□ -0.34
CENPAP49450 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 AHCYP2-201ENST00000430630 1300 ntBASIC12.92□□□□□ -0.34
CENPAP49450 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.92□□□□□ -0.34
CENPAP49450 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 TRIM80P-201ENST00000455685 2848 ntBASIC12.92□□□□□ -0.34
CENPAP49450 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CENPAP49450 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms