Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 CICP14-201ENST00000629111 2732 ntBASIC14.73□□□□□ -0.05
MTHFRP42898 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MTHFRP42898 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MTHFRP42898 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 LINC00115-201ENST00000473798 1317 ntBASIC14.73□□□□□ -0.05
MTHFRP42898 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
MTHFRP42898 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
MTHFRP42898 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.73□□□□□ -0.05
MTHFRP42898 AP000244.1-201ENST00000424582 201 ntBASIC14.73□□□□□ -0.05
MTHFRP42898 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MTHFRP42898 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
MTHFRP42898 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MTHFRP42898 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.73□□□□□ -0.05
MTHFRP42898 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.73□□□□□ -0.05
MTHFRP42898 AC104506.1-201ENST00000609247 429 ntBASIC14.73□□□□□ -0.05
MTHFRP42898 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
MTHFRP42898 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 AC005840.4-201ENST00000541242 2494 ntBASIC14.73□□□□□ -0.05
MTHFRP42898 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
MTHFRP42898 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.73□□□□□ -0.05
MTHFRP42898 FKBP4P8-201ENST00000610931 1369 ntBASIC14.73□□□□□ -0.05
MTHFRP42898 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
MTHFRP42898 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
MTHFRP42898 AC064801.2-201ENST00000625052 1303 ntBASIC14.72□□□□□ -0.05
MTHFRP42898 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
MTHFRP42898 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 AL365181.1-201ENST00000564032 1828 ntBASIC14.72□□□□□ -0.05
MTHFRP42898 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
MTHFRP42898 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.72□□□□□ -0.05
MTHFRP42898 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.72□□□□□ -0.05
MTHFRP42898 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.72□□□□□ -0.05
MTHFRP42898 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.72□□□□□ -0.05
MTHFRP42898 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.72□□□□□ -0.05
MTHFRP42898 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.72□□□□□ -0.05
MTHFRP42898 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 KNOP1P1-201ENST00000542108 989 ntBASIC14.72□□□□□ -0.05
MTHFRP42898 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.72□□□□□ -0.05
MTHFRP42898 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.72□□□□□ -0.05
MTHFRP42898 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.72□□□□□ -0.05
MTHFRP42898 TYMSP2-201ENST00000589501 424 ntBASIC14.72□□□□□ -0.05
MTHFRP42898 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.72□□□□□ -0.05
MTHFRP42898 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
MTHFRP42898 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.72□□□□□ -0.05
MTHFRP42898 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.72□□□□□ -0.05
MTHFRP42898 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.72□□□□□ -0.05
MTHFRP42898 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
MTHFRP42898 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
MTHFRP42898 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
MTHFRP42898 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.72□□□□□ -0.05
MTHFRP42898 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MTHFRP42898 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms