Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 SCARNA21-201ENST00000517026 139 ntBASIC13.38□□□□□ -0.27
CDKN2CP42773 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.38□□□□□ -0.27
CDKN2CP42773 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 SNX29P1-201ENST00000548357 1007 ntBASIC13.38□□□□□ -0.27
CDKN2CP42773 AC079316.1-201ENST00000548397 411 ntBASIC13.38□□□□□ -0.27
CDKN2CP42773 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.38□□□□□ -0.27
CDKN2CP42773 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.38□□□□□ -0.27
CDKN2CP42773 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.38□□□□□ -0.27
CDKN2CP42773 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.38□□□□□ -0.27
CDKN2CP42773 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDKN2CP42773 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CDKN2CP42773 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.38□□□□□ -0.27
CDKN2CP42773 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.38□□□□□ -0.27
CDKN2CP42773 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 AC004899.2-201ENST00000622993 3860 ntBASIC13.37□□□□□ -0.27
CDKN2CP42773 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.37□□□□□ -0.27
CDKN2CP42773 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.37□□□□□ -0.27
CDKN2CP42773 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.37□□□□□ -0.27
CDKN2CP42773 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CDKN2CP42773 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDKN2CP42773 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CDKN2CP42773 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.37□□□□□ -0.27
CDKN2CP42773 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDKN2CP42773 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.36□□□□□ -0.27
CDKN2CP42773 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
CDKN2CP42773 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDKN2CP42773 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDKN2CP42773 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
CDKN2CP42773 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.36□□□□□ -0.27
CDKN2CP42773 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CDKN2CP42773 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CDKN2CP42773 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDKN2CP42773 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDKN2CP42773 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDKN2CP42773 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDKN2CP42773 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDKN2CP42773 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDKN2CP42773 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CDKN2CP42773 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.36□□□□□ -0.27
CDKN2CP42773 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDKN2CP42773 LINC01165-201ENST00000445190 1623 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms