Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13□□□□□ -0.33
RFC3P40938 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RFC3P40938 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13□□□□□ -0.33
RFC3P40938 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13□□□□□ -0.33
RFC3P40938 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13□□□□□ -0.33
RFC3P40938 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
RFC3P40938 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13□□□□□ -0.33
RFC3P40938 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13□□□□□ -0.33
RFC3P40938 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13□□□□□ -0.33
RFC3P40938 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RFC3P40938 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13□□□□□ -0.33
RFC3P40938 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13□□□□□ -0.33
RFC3P40938 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13□□□□□ -0.33
RFC3P40938 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13□□□□□ -0.33
RFC3P40938 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RFC3P40938 RN7SL736P-201ENST00000613111 269 ntBASIC13□□□□□ -0.33
RFC3P40938 AP003419.4-201ENST00000616071 517 ntBASIC13□□□□□ -0.33
RFC3P40938 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 AC011491.1-203ENST00000637688 543 ntBASIC13□□□□□ -0.33
RFC3P40938 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RFC3P40938 AC005562.1-201ENST00000583030 3219 ntBASIC13□□□□□ -0.33
RFC3P40938 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RFC3P40938 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
RFC3P40938 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
RFC3P40938 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13□□□□□ -0.33
RFC3P40938 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.99□□□□□ -0.33
RFC3P40938 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.99□□□□□ -0.33
RFC3P40938 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.99□□□□□ -0.33
RFC3P40938 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RFC3P40938 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
RFC3P40938 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 LINC00115-201ENST00000473798 1317 ntBASIC12.99□□□□□ -0.33
RFC3P40938 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
RFC3P40938 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.99□□□□□ -0.33
RFC3P40938 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.99□□□□□ -0.33
RFC3P40938 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 RPL17P11-201ENST00000417593 544 ntBASIC12.99□□□□□ -0.33
RFC3P40938 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.99□□□□□ -0.33
RFC3P40938 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.99□□□□□ -0.33
RFC3P40938 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.99□□□□□ -0.33
RFC3P40938 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 CHCHD2P9-201ENST00000461726 456 ntBASIC12.99□□□□□ -0.33
RFC3P40938 RN7SL8P-201ENST00000461771 266 ntBASIC12.99□□□□□ -0.33
RFC3P40938 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.99□□□□□ -0.33
RFC3P40938 MRPL22P1-201ENST00000505398 616 ntBASIC12.99□□□□□ -0.33
RFC3P40938 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
RFC3P40938 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.99□□□□□ -0.33
RFC3P40938 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 NPM1P43-201ENST00000558669 786 ntBASIC12.99□□□□□ -0.33
RFC3P40938 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.99□□□□□ -0.33
RFC3P40938 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.99□□□□□ -0.33
RFC3P40938 MIR3180-2-201ENST00000581748 88 ntBASIC12.99□□□□□ -0.33
RFC3P40938 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.99□□□□□ -0.33
RFC3P40938 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RFC3P40938 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.99□□□□□ -0.33
RFC3P40938 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.99□□□□□ -0.33
RFC3P40938 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFC3P40938 AL591122.2-201ENST00000624125 1853 ntBASIC12.99□□□□□ -0.33
RFC3P40938 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 4544.1 ms