Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
USP6P35125 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC18.53■□□□□ 0.56
USP6P35125 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
USP6P35125 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
USP6P35125 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.52■□□□□ 0.56
USP6P35125 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
USP6P35125 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.52■□□□□ 0.56
USP6P35125 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC18.52■□□□□ 0.56
USP6P35125 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC18.52■□□□□ 0.56
USP6P35125 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.52■□□□□ 0.56
USP6P35125 GRAMD4P6-201ENST00000556999 244 ntBASIC18.52■□□□□ 0.56
USP6P35125 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USP6P35125 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 AC005746.3-201ENST00000614751 393 ntBASIC18.52■□□□□ 0.56
USP6P35125 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
USP6P35125 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC18.52■□□□□ 0.56
USP6P35125 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC18.52■□□□□ 0.56
USP6P35125 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
USP6P35125 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.52■□□□□ 0.56
USP6P35125 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6P35125 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
USP6P35125 AC034205.3-201ENST00000603595 1376 ntBASIC18.52■□□□□ 0.55
USP6P35125 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
USP6P35125 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6P35125 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC18.52■□□□□ 0.55
USP6P35125 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6P35125 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 SERF2-204ENST00000402131 586 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 KRT18P44-201ENST00000416086 1285 ntBASIC18.51■□□□□ 0.55
USP6P35125 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 AC023141.7-201ENST00000430646 407 ntBASIC18.51■□□□□ 0.55
USP6P35125 KRT19P4-201ENST00000443208 943 ntBASIC18.51■□□□□ 0.55
USP6P35125 TREX1-203ENST00000456089 629 ntTSL 3 BASIC18.51■□□□□ 0.55
USP6P35125 SNORA47-201ENST00000458862 138 ntBASIC18.51■□□□□ 0.55
USP6P35125 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 AC233724.9-201ENST00000511694 407 ntBASIC18.51■□□□□ 0.55
USP6P35125 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC18.51■□□□□ 0.55
USP6P35125 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC18.51■□□□□ 0.55
USP6P35125 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC18.51■□□□□ 0.55
USP6P35125 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC18.51■□□□□ 0.55
USP6P35125 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC18.51■□□□□ 0.55
USP6P35125 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 PTPN20CP-201ENST00000614090 920 ntBASIC18.51■□□□□ 0.55
USP6P35125 AC090510.3-201ENST00000615831 821 ntBASIC18.51■□□□□ 0.55
USP6P35125 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
USP6P35125 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP6P35125 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.51■□□□□ 0.55
USP6P35125 AP000437.1-201ENST00000624057 2085 ntBASIC18.51■□□□□ 0.55
USP6P35125 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
USP6P35125 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC18.51■□□□□ 0.55
USP6P35125 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP6P35125 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.51■□□□□ 0.55
USP6P35125 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC18.51■□□□□ 0.55
USP6P35125 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC18.51■□□□□ 0.55
USP6P35125 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6P35125 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6P35125 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
USP6P35125 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP6P35125 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC18.5■□□□□ 0.55
USP6P35125 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
USP6P35125 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC18.5■□□□□ 0.55
USP6P35125 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC18.5■□□□□ 0.55
USP6P35125 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
USP6P35125 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC18.5■□□□□ 0.55
USP6P35125 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP6P35125 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms