Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 AC003102.2-201ENST00000589195 1469 ntBASIC16.36■□□□□ 0.21
CAPN2P17655 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 AC127383.1-201ENST00000444697 1800 ntBASIC16.36■□□□□ 0.21
CAPN2P17655 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN2P17655 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 AL672207.1-201ENST00000328462 1570 ntBASIC16.36■□□□□ 0.21
CAPN2P17655 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN2P17655 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 KRT17P4-201ENST00000429445 819 ntBASIC16.36■□□□□ 0.21
CAPN2P17655 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
CAPN2P17655 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.36■□□□□ 0.21
CAPN2P17655 KRT8P1-201ENST00000557533 1207 ntBASIC16.36■□□□□ 0.21
CAPN2P17655 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN2P17655 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN2P17655 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN2P17655 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CAPN2P17655 CTBP2P8-201ENST00000422584 1330 ntBASIC16.36■□□□□ 0.21
CAPN2P17655 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN2P17655 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN2P17655 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN2P17655 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 AC004554.1-201ENST00000422830 1468 ntBASIC16.35■□□□□ 0.21
CAPN2P17655 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CAPN2P17655 AL118506.1-201ENST00000601296 3082 ntBASIC16.35■□□□□ 0.21
CAPN2P17655 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN2P17655 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CAPN2P17655 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 ACTBP7-201ENST00000418351 1124 ntBASIC16.35■□□□□ 0.21
CAPN2P17655 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN2P17655 RN7SL494P-201ENST00000461517 304 ntBASIC16.35■□□□□ 0.21
CAPN2P17655 AC023906.1-201ENST00000486386 453 ntBASIC16.35■□□□□ 0.21
CAPN2P17655 AC083801.1-201ENST00000491689 358 ntBASIC16.35■□□□□ 0.21
CAPN2P17655 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN2P17655 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
CAPN2P17655 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 AC003686.1-201ENST00000550956 1034 ntBASIC16.35■□□□□ 0.21
CAPN2P17655 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN2P17655 EIF5AP2-201ENST00000585668 1047 ntBASIC16.35■□□□□ 0.21
CAPN2P17655 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN2P17655 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN2P17655 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms